☆22Aug 2, 2023Updated 2 years ago
Alternatives and similar repositories for ST_BarcodeMap
Users that are interested in ST_BarcodeMap are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- VT3D: a versatile Visualization Toolbox for 3D spatial transcriptomics atlas☆14Nov 6, 2024Updated last year
- ☆194Sep 18, 2024Updated last year
- ☆14Mar 18, 2022Updated 4 years ago
- Single-cell Graph Cuts Optimization☆16Apr 27, 2024Updated 2 years ago
- luigi based workflow for analysising WGS samples collecting from different source. It will auto clustering, annotating gene or species, a…☆10Nov 28, 2023Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Code for the paper Aligning Distant Sequences to Graphs using Long Seed Sketches.☆13Nov 1, 2022Updated 3 years ago
- imNet: a Sequence Network Construction Toolkit☆20Jul 7, 2020Updated 6 years ago
- An Fast variant calling tool to detection germline and somatic variants☆12Feb 21, 2026Updated 5 months ago
- Spatial Single Cell transcriptomic library☆22Jan 15, 2026Updated 6 months ago
- ☆20Dec 9, 2021Updated 4 years ago
- RabbitKSSD: accelerating genome distance estimation on modern multi-core architectures☆12Jun 5, 2024Updated 2 years ago
- ☆49Jun 3, 2026Updated last month
- Spatiotemporal modeling of spatial transcriptomics☆342Feb 25, 2026Updated 4 months ago
- ☆55Aug 1, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆12Sep 22, 2025Updated 9 months ago
- Spatial transcriptome analysis in python☆25Jan 26, 2025Updated last year
- Analysis of smFISH data☆12Aug 27, 2018Updated 7 years ago
- High-throughput mapping and domain partitioning of antigen receptor sequences☆55Updated this week
- ☆14Oct 11, 2019Updated 6 years ago
- Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)☆21Jun 22, 2023Updated 3 years ago
- ☆11Dec 8, 2023Updated 2 years ago
- iFISH Probe Design: a Python3 package to build iFISH probes.☆12Mar 11, 2022Updated 4 years ago
- 🏔 coverage extraction from BAM/CRAM files, supporting targets 📊☆67May 23, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.☆17Aug 26, 2025Updated 10 months ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆41Sep 5, 2021Updated 4 years ago
- This repository contains the scripts for reproducing the results presented in Costa AC, Ahamed T, Jordan D, Stephens GJ (2023) "A Markov…☆11Sep 25, 2025Updated 9 months ago
- Fast alignment tool based on bwa-mem☆26Feb 22, 2026Updated 4 months ago
- Genome-in-a-Bottle stratifications for major references☆15Apr 28, 2025Updated last year
- ☆10Jun 9, 2020Updated 6 years ago
- The new version is available at https://github.com/RabbitBio/RabbitQCPlus☆25Jun 20, 2022Updated 4 years ago
- Cross-platform data for sequencing-based spatial transcriptomics benchmarking☆13Oct 26, 2023Updated 2 years ago
- ProQDock is a Protein-Protein docking scoring program that uses high level coordinate driven features compiled and trained by a Support V…☆11Dec 11, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- cuDTW++: Ultra-Fast Dynamic Time Warping on CUDA-enabled GPUs☆34May 11, 2020Updated 6 years ago
- Echarts(v5.x | next) components for react.☆11Mar 4, 2021Updated 5 years ago
- ☆10Nov 6, 2023Updated 2 years ago
- Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"☆11Sep 30, 2019Updated 6 years ago
- ☆12Apr 13, 2020Updated 6 years ago
- analysis pipeline for CODEC data☆13Apr 22, 2026Updated 2 months ago
- ☆14Jul 22, 2025Updated 11 months ago