Robust Integration of Single-Cell Cytometry Datasets
☆36Apr 29, 2026Updated 2 months ago
Alternatives and similar repositories for cyCombine
Users that are interested in cyCombine are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cytofin-an R package for CyTOF data integration☆12Jan 13, 2022Updated 4 years ago
- R library to normalize cytometry data☆41Jul 7, 2026Updated 2 weeks ago
- Flow cytometry analysis workflow. The aim of this project is to provide an intuitive workflow for the analysis of high-dimensionality cyt…☆28Apr 29, 2026Updated 2 months ago
- A short script for converting .csv file data into an .fcs file, and vise versa.☆19Apr 2, 2021Updated 5 years ago
- Calculation of distance metrics for matrices☆26Mar 1, 2019Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Simplified script for applying the t-SNE diff method on high parameter flow cytometry data☆10Oct 31, 2023Updated 2 years ago
- Cytometry dATa anALYsis Tools☆75Apr 28, 2026Updated 2 months ago
- R package for differential discovery analyses in high-dimensional cytometry data☆25Jul 14, 2026Updated last week
- R package for semi-supervised single-cell data integration☆101Jan 27, 2026Updated 5 months ago
- Core flow cytometry infrastructure☆60May 27, 2026Updated last month
- Scalable, downsampling-free automated cell-population discovery, feature engineering, classification and visualization of single-cell (mo…☆12Aug 30, 2021Updated 4 years ago
- ☆27May 16, 2025Updated last year
- Flexible, probablistic metrics for quality control of scRNA-seq data☆22May 27, 2026Updated last month
- Gene Set Enrichment Analysis Made Awesome☆12May 11, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆12Apr 19, 2023Updated 3 years ago
- R package for pre-processing of mass and flow cytometry data☆48Sep 6, 2022Updated 3 years ago
- Querying cellular states and programs by learning representations of gene sets☆16Nov 2, 2025Updated 8 months ago
- An R package to produce full spectrum flow cytometry plots outside the acquisition software.☆11May 9, 2023Updated 3 years ago
- an interactive explorer for flow cytometry data☆19Jul 8, 2024Updated 2 years ago
- A tutorial for the analysis of high-dimensional flow cytometry data☆28Aug 28, 2019Updated 6 years ago
- Course Website☆399Updated this week
- R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem☆21Apr 14, 2025Updated last year
- K-means clustering for large single-cell datasets☆13Feb 10, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆30Apr 5, 2025Updated last year
- Cluster Identity Predictor (R package implementation)☆22Mar 8, 2022Updated 4 years ago
- Using TCR and expression for sequence embedding☆63Jan 6, 2026Updated 6 months ago
- Physalia course Machine Learning for Multi-Omics Integration☆21Jun 11, 2025Updated last year
- Huge-scale, high-performance flow cytometry clustering in Julia☆36Nov 3, 2025Updated 8 months ago
- Single cell proteomics data processing☆33Apr 6, 2026Updated 3 months ago
- ☆34May 29, 2026Updated last month
- Implementation of MaSigPro for scRNA-Seq Data☆20Jul 31, 2024Updated last year
- Detection of PatIent-Level distances from single cell genomics and pathomics data with Optimal Transport (PILOT)☆26Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- R package for metabolic enzyme enrichment anaylsis☆14Oct 24, 2025Updated 9 months ago
- ☆17Apr 17, 2024Updated 2 years ago
- A computational toolkit in R for the integration, exploration, and analysis of high-dimensional single-cell cytometry and imaging data.☆71Sep 19, 2025Updated 10 months ago
- The files and presentation from the Cytometry Core Facility flow cytometry data analysis course in R☆25Sep 6, 2019Updated 6 years ago
- Robust single cell clustering and comparison of population compositions across tissues and experimental models via similarity analysis.☆15Jul 16, 2023Updated 3 years ago
- Detect hierarchical structures in cell-cell communications☆16Jan 26, 2025Updated last year
- Integrative analysis for scRNA-seq and scTCR-/scBCR-seq data☆21Updated this week