xzenglab / TAGPPIView external linksLinks
☆22May 31, 2023Updated 2 years ago
Alternatives and similar repositories for TAGPPI
Users that are interested in TAGPPI are comparing it to the libraries listed below
Sorting:
- E(3) equivariant graph neural network for PPI site prediction☆10Sep 18, 2023Updated 2 years ago
- ☆69Nov 1, 2022Updated 3 years ago
- ☆16Jul 13, 2022Updated 3 years ago
- a novel DTA predition method using graph neural network☆76Jul 12, 2023Updated 2 years ago
- A deep learning framework for deubiquitnase-substrate interaction identification☆11Jul 31, 2025Updated 6 months ago
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆15Dec 6, 2023Updated 2 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Oct 15, 2025Updated 3 months ago
- GPT-based protein language model for PTM site prediction☆19Aug 11, 2024Updated last year
- ☆11Mar 16, 2024Updated last year
- Kdrew's scripts for handling protein complex map data☆14Jun 12, 2025Updated 8 months ago
- Protein-protein interacting site predictor using deep graph convolutional network☆12Jan 3, 2023Updated 3 years ago
- Tutorial files☆12Aug 7, 2024Updated last year
- ☆27Dec 14, 2025Updated last month
- Fully convolutional neural networks for protein residue-residue contact prediction☆43Mar 25, 2019Updated 6 years ago
- Docking benchmark 5 - cleaned and ready to use for HADDOCK☆14Nov 17, 2025Updated 2 months ago
- DeepContact Software☆26Jun 16, 2018Updated 7 years ago
- web based visualisation of CLMS data☆13Nov 22, 2022Updated 3 years ago
- MaveDB database web application☆13Nov 17, 2023Updated 2 years ago
- Functions to Create Publication-Quality Plots☆16Jan 21, 2026Updated 3 weeks ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆122Sep 15, 2020Updated 5 years ago
- Protein-protein interaction sites prediction through combining local and global features with deep neural networks☆54Oct 12, 2019Updated 6 years ago
- A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction☆61Aug 7, 2021Updated 4 years ago
- ☆34Dec 15, 2023Updated 2 years ago
- DeepAAI☆35Dec 25, 2024Updated last year
- ProtVec can be used in protein interaction predictions, structure prediction, and protein data visualization.☆33Dec 8, 2022Updated 3 years ago
- Computationally Restoring the Potency of a Clinical Antibody☆19Mar 1, 2024Updated last year
- DeepCoSI: a Structure-based Deep Graph Learning Network Method for Covalent Binding Site Identification.☆14Oct 22, 2023Updated 2 years ago
- A label free quantification tool.☆18Jan 13, 2026Updated last month
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆109Jan 6, 2026Updated last month
- ☆13May 30, 2019Updated 6 years ago
- Protein-protein binding affinity benchmark☆16Feb 14, 2025Updated 11 months ago
- Orientation of the protein-protein interaction network using network diffusion techniques☆15Mar 16, 2021Updated 4 years ago
- Scoring methods for predicting the DDG upon protein mutation☆16Feb 20, 2023Updated 2 years ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆46Jul 24, 2024Updated last year
- Analysis of contacts in molecular dynamics trajectories☆45Nov 4, 2019Updated 6 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆21Apr 12, 2019Updated 6 years ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Jan 30, 2019Updated 7 years ago
- A program fror inter-protein contact prediction from structures of interacting proteins☆20Jun 1, 2024Updated last year
- SPVec: A Word2vec-inspired feature representation method for Drug-Target Interaction Prediction☆20Jan 8, 2020Updated 6 years ago