xzenglab / TAGPPI
☆19Updated last year
Alternatives and similar repositories for TAGPPI:
Users that are interested in TAGPPI are comparing it to the libraries listed below
- ☆86Updated 2 years ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆59Updated 9 months ago
- DeepAAI☆31Updated 4 months ago
- Machine learning models for antibody sequences in PyTorch☆39Updated 3 years ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated last year
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆30Updated 4 months ago
- Public repository describing training and testing of AntiBERTa.☆58Updated 2 years ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆98Updated 7 months ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆41Updated 9 months ago
- a deep learning architecture for RNA-ligand binding sites prediction☆18Updated last year
- A Python 3 version of the protein descriptor package propy☆41Updated 2 years ago
- ☆52Updated 9 months ago
- Fast and easy contact prediction.☆38Updated 11 months ago
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆20Updated 8 months ago
- A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction☆60Updated 3 years ago
- This repository contains the stand-alone tool for MusiteDeep server☆33Updated 4 years ago
- ☆68Updated 4 years ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆36Updated 2 years ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆26Updated 2 years ago
- ☆17Updated last year
- Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction☆34Updated 4 years ago
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆30Updated 2 years ago
- ☆32Updated 2 years ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- MSA-Regularized Protein Sequence Transformer toward Predicting Genome-Wide Chemical-Protein Interactions: Application to GPCRome Deorphan…☆11Updated 2 years ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆24Updated last year
- ☆18Updated 5 years ago
- ☆48Updated last year
- Protein-protein interaction sites prediction through combining local and global features with deep neural networks☆54Updated 5 years ago
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 3 years ago