mheinzinger / SeqVec
Modelling the Language of Life - Deep Learning Protein Sequences
☆72Updated 4 years ago
Alternatives and similar repositories for SeqVec
Users that are interested in SeqVec are comparing it to the libraries listed below
Sorting:
- Modelling the Language of Life - Deep Learning Protein Sequences☆119Updated 4 years ago
- Protein sequence classification with self-supervised pretraining☆82Updated 3 years ago
- ☆109Updated 3 years ago
- PaccMann models for protein language modeling☆42Updated 3 years ago
- Multi-task and masked language model-based protein sequence embedding models.☆102Updated 3 years ago
- ☆128Updated 4 years ago
- A generative latent variable model for biological sequence families.☆215Updated 3 years ago
- A new approach for representing biological sequences☆99Updated 8 months ago
- Variational autoencoder for protein sequences - add metal binding sites and generate sequences for novel topologies☆86Updated last year
- A Python package for extracting protein sequence features☆59Updated 2 years ago
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆63Updated last year
- Analysis and figure code from Alley et al. 2019.☆59Updated 2 years ago
- Public repository describing training and testing of AntiBERTa.☆59Updated 2 years ago
- A repository for neural representational learning of RNA secondary structures☆32Updated 5 years ago
- Repository for publicly available deep learning models developed in Rosetta community☆114Updated 3 years ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- ☆57Updated 2 years ago
- ☆106Updated last year
- Evolutionary velocity with protein language models☆90Updated last year
- DeepGO with GOPlus axioms☆93Updated last year
- Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.☆107Updated last year
- AbLang: A language model for antibodies☆139Updated last year
- Paratope Prediction using Deep Learning☆59Updated last year
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆77Updated 9 months ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆124Updated 3 years ago
- ☆53Updated last year
- Mutation effects predicted from sequence co-variation☆65Updated 7 years ago
- trRosetta for protein design☆179Updated 4 years ago
- Protein-compound affinity prediction through unified RNN-CNN☆146Updated 9 months ago
- Function prediction using a deep ontology-aware classifier☆83Updated 2 years ago