brineylab / antirefLinks
AntiRef: reference clusters of human antibody sequences
☆12Updated last year
Alternatives and similar repositories for antiref
Users that are interested in antiref are comparing it to the libraries listed below
Sorting:
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 7 months ago
- Tools for annotation, processing and ML for antibody sequences☆33Updated this week
- Fast protein structure searching or your money back☆114Updated 2 weeks ago
- ☆47Updated 9 months ago
- Mutation effects predicted from sequence co-variation☆70Updated 8 years ago
- Predict the structure of immune receptor proteins☆57Updated 11 months ago
- Machine learning-driven antibody design☆60Updated 2 years ago
- Tool for rapid clustering of antibody models by the structure of their CDRs.☆23Updated 3 months ago
- ☆43Updated last year
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆59Updated 7 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- ☆69Updated last year
- Graph Network for protein-protein interface including language model features☆32Updated last year
- ☆53Updated 2 months ago
- Detection of remote homology by comparison of protein language model representations☆56Updated 10 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆91Updated last week
- Code and Data for Generative modeling for AAV design☆10Updated last year
- Python package to manage protein structures and their annotations☆44Updated last year
- Biological prediction models made simple.☆45Updated this week
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆71Updated 4 months ago
- Evolutionary velocity with protein language models☆94Updated 2 years ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆34Updated 3 years ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆82Updated last year
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆108Updated last month
- Contact map alignment☆41Updated 4 years ago
- Direct coupling analysis software for protein and RNA sequences☆53Updated 3 months ago
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆73Updated 2 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- Inference of couplings in proteins and RNAs from sequence variation☆113Updated 2 years ago