Interactive Python notebooks for PDBe API training
☆58Feb 11, 2026Updated last month
Alternatives and similar repositories for pdbe-api-training
Users that are interested in pdbe-api-training are comparing it to the libraries listed below
Sorting:
- Slides + Iframe = sliFrame☆55Apr 6, 2025Updated 11 months ago
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆32Jan 22, 2026Updated 2 months ago
- Webserver & command-line tool for search of APO (unbound) protein structures from HOLO (bound) forms and vice versa. http://apoholo.cz☆17Jun 14, 2024Updated last year
- A Python tool for parsing and analyzing electron density maps data available from the worldwide Protein Data Bank☆12Sep 28, 2023Updated 2 years ago
- Web application for protein-ligand binding sites analysis and visualization☆16Jan 9, 2023Updated 3 years ago
- Calculation of interatomic interactions in molecular structures☆123Sep 3, 2024Updated last year
- // PROJECT PAUSED FOR NOW (lack of capacity) // Protein cavity identification and automatic subpocket decomposition☆45Jul 23, 2023Updated 2 years ago
- A lightweight pure python package for reading, writing and manipulating mmCIF files distributed by the wwPDB"☆38Oct 30, 2023Updated 2 years ago
- Automatic extraction of interacting compound-target pairs from ChEMBL.☆21Sep 23, 2025Updated 5 months ago
- mmCIF-based extension dictionary for computed structure models☆24Feb 5, 2026Updated last month
- ☆19Jan 24, 2023Updated 3 years ago
- Voronota is a software tool for analyzing three-dimensional structures of biological macromolecules using the Voronoi diagram of atomic b…☆39Mar 13, 2026Updated last week
- CIF (Crystallographic Information File) support for Visual Studio Code.☆13Nov 16, 2025Updated 4 months ago
- Mol* as anywidget☆52Oct 13, 2025Updated 5 months ago
- ☆56May 20, 2025Updated 10 months ago
- Data from the COVID Moonshot project☆20Nov 9, 2023Updated 2 years ago
- wwPDB PDBx/mmCIF Dictionary☆10Updated this week
- MOLeculAR structure annoTator☆33Oct 2, 2024Updated last year
- Fast protein structure searching or your money back☆118Updated this week
- Functions to scrape GPCR data from the web.☆19Nov 18, 2021Updated 4 years ago
- Template-based RNA secondary structure visualization☆28Nov 20, 2024Updated last year
- Set of useful HADDOCK utility scripts☆57Sep 19, 2025Updated 6 months ago
- PREVENT: PRotein Engineering by Variational frEe eNergy approximaTion☆13Jul 4, 2024Updated last year
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆13Feb 12, 2026Updated last month
- ☆30May 15, 2025Updated 10 months ago
- ☆13Feb 23, 2024Updated 2 years ago
- Machine learning experiments for CheckMyBlob☆14Jun 14, 2018Updated 7 years ago
- The central entry point to the P2Rank project with links to the individual projects, including references to documentation, datasets, etc…☆13Feb 11, 2026Updated last month
- GaudiMM: A modular optimization platform for molecular design☆32May 10, 2024Updated last year
- Quick mapping of Uniprot sequences to PDB structures☆36Apr 1, 2025Updated 11 months ago
- A set of python tools to deal with PDB chemical components definitions for small molecules, taken from the wwPDB Chemical Component Dicti…☆75Feb 28, 2026Updated 3 weeks ago
- ☆30Jan 21, 2024Updated 2 years ago
- Webpage of the Bonvinlab @ Utrecht University and HADDOCK software☆13Updated this week
- Biomolecular Illustration Tool☆124Aug 17, 2024Updated last year
- Computational Chemistry☆26Jul 11, 2025Updated 8 months ago
- This is a GitHub Repository containing the data and code used for a thorough comparison of 11 ligand binding site prediction tools☆17Nov 19, 2024Updated last year
- A dependency-free cross-platform swiss army knife for PDB files.☆449Feb 3, 2026Updated last month
- ☆88Nov 18, 2025Updated 4 months ago
- Python interface for the RCSB PDB search API.☆65Mar 26, 2025Updated 11 months ago