multicom-toolbox / DNCON2
Deep convolutional neural networks for protein contact map prediction
☆23Updated 5 years ago
Alternatives and similar repositories for DNCON2:
Users that are interested in DNCON2 are comparing it to the libraries listed below
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆21Updated 5 years ago
- ☆29Updated 4 years ago
- PyDock Tutorial☆30Updated 6 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆41Updated 2 years ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆26Updated 3 years ago
- ☆24Updated 3 years ago
- ☆19Updated last year
- DISTEVAL: A web-server for evaluating protein inter-residue distances☆18Updated 3 years ago
- Material to run the HADDOCK antibody-antigen modelling protocol☆22Updated last year
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆23Updated 5 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆19Updated 5 years ago
- RaptorX-Property: a Standalone Package for Protein Structure Property Prediction☆17Updated 5 years ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆40Updated last year
- ☆26Updated 7 months ago
- a fast and accurate physical energy function extended from EvoEF for protein sequence design☆25Updated last year
- Fully convolutional neural networks for protein residue-residue contact prediction☆44Updated 6 years ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆34Updated 2 years ago
- ☆34Updated 3 years ago
- De novo design of small molecule binding sites into proteins☆13Updated 3 years ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆16Updated last year
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆50Updated 2 weeks ago
- Deep ResNet-based protein contact prediction☆19Updated 4 years ago
- ☆20Updated 10 months ago
- ☆20Updated 2 years ago
- to assess structural quality of RNA using 3D CNN☆13Updated 6 years ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆19Updated 2 weeks ago
- A Python 3 version of the protein descriptor package propy☆41Updated 2 years ago
- MEGADOCK on Google Colaboratory☆15Updated last year