multicom-toolbox / DNCON2Links
Deep convolutional neural networks for protein contact map prediction
☆23Updated 6 years ago
Alternatives and similar repositories for DNCON2
Users that are interested in DNCON2 are comparing it to the libraries listed below
Sorting:
- ☆29Updated 5 years ago
- An open-source library for the analysis of protein interactions.☆32Updated 3 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- ☆86Updated last year
- Contact map alignment☆41Updated 4 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- ☆27Updated last week
- software used in paper "Antibody interface prediction with 3D Zernike descriptors and SVM"☆13Updated 4 years ago
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆21Updated 6 years ago
- ☆23Updated 4 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆21Updated 6 years ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆44Updated 2 years ago
- PointSite: a point cloud segmentation tool for identification of protein ligand binding atoms☆57Updated 2 years ago
- PyDock Tutorial☆34Updated 7 years ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆17Updated last year
- ☆21Updated last year
- RosettaDesign using PyRosetta☆32Updated 6 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- MpbPPI: A multi-task pre-training-based equivariant approach for the prediction of the effect of amino acid mutations on protein-protein …☆16Updated last year
- Physical energy function for protein sequence design☆33Updated 2 years ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆48Updated last year
- DLPacker☆31Updated last year
- Improved ab initio protein structure reconstruction☆15Updated 7 years ago
- ☆25Updated 3 years ago
- Analysis of contacts in molecular dynamics trajectories☆43Updated 5 years ago
- Set of useful HADDOCK utility scripts☆55Updated last month
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆69Updated last year
- Generates consistent PSSM and/or PDB files for protein-protein complexes☆20Updated 3 years ago
- Code for "Protein Docking Model Evaluation by Graph Neural Networks"☆59Updated 2 years ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆41Updated 4 months ago