Alternatives and similar repositories for ZIBR:

Users that are interested in ZIBR are comparing it to the libraries listed below

• brendankelly / micropower
  power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA
  ☆35Updated 9 years ago
• spholmes / F1000_workflow
  ☆43Updated 7 years ago
• statdivlab / corncob
  Count Regression for Correlated Observations with the Beta-binomial
  ☆104Updated 4 months ago
• joey711 / shiny-phyloseq
  An interactive web application for demonstrating and using phyloseq.
  ☆60Updated 5 years ago
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆69Updated last year
• mblstamps / stamps2019
  Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA
  ☆35Updated 5 years ago
• tpq / propr
  [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data
  ☆69Updated last month
• SchlossLab / schtools
  Schloss Lab Tools for Reproducible Microbiome Research 💩
  ☆30Updated last year
• umerijaz / microbiomeSeq
  An R package for microbial community analysis in an environmental context
  ☆66Updated 4 years ago
• adw96 / DivNet
  diversity estimation under ecological networks
  ☆83Updated last year
• adw96 / breakaway
  Species richness with high diversity
  ☆68Updated last year
• ggloor / ALDEx_bioc
  ALDEx_bioc is the working directory for updating bioconductor
  ☆27Updated last year
• yijuanhu / LDM-Archive
  Linear Decomposition Model
  ☆24Updated last year
• vallenderlab / MicrobiomeR
  A comprehensive and customizable R package for microbiome analysis.
  ☆21Updated 2 years ago
• mikemc / speedyseq
  Speedy versions of phyloseq functions
  ☆46Updated 8 months ago
• reptalex / phylofactor
  ☆26Updated 10 months ago
• ying14 / yingtools2
  Ying's tools for analysis, with particular focus on microbiome data
  ☆41Updated last week
• statdivlab / tinyvamp
  ☆19Updated last year
• nhanhocu / metamicrobiomeR
  An R package for analysis of microbiome relative abundance data using zero inflated beta GAMLSS and meta-analysis across microbiome studi…
  ☆33Updated 4 years ago
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆89Updated 2 months ago
• ggloor / CoDa_microbiome_tutorial
  Workshop for NGS'18 conference, Barcelona 2018
  ☆24Updated 6 years ago
• fkeck / bioseq
  A Toolbox for Manipulating Biological Sequences in R
  ☆22Updated 2 years ago
• vdblab / FLORAL
  Fit LOg-RAtio Lasso regression for compositional covariates
  ☆12Updated last month
• mblstamps / stamps2018
  STAMPS 2018 course
  ☆16Updated 6 years ago
• const-ae / tidygenomics
  Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/
  ☆102Updated 3 years ago
• ggloor / CoDaSeq
  Functions for compositional analysis of high throughput sequencing
  ☆29Updated last year
• vmikk / metagMisc
  Miscellaneous functions for metagenomic analysis.
  ☆47Updated 6 months ago
• lawremi / ggbio
  Grid and ggplot2 based visualization for biological data
  ☆111Updated last year
• twbattaglia / btools
  A set of R functions that help faciliate a lot of tedious processing
  ☆18Updated 6 years ago
• jsilve24 / philr
  Phylogenetic Isometric Log Ratio
  ☆19Updated 3 months ago