BiomeNED main code
☆12Jul 25, 2019Updated 7 years ago
Alternatives and similar repositories for BiomeNED
Users that are interested in BiomeNED are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Feb 3, 2023Updated 3 years ago
- ☆21Dec 15, 2020Updated 5 years ago
- Zero-Inflated Beta Random Effect model☆31Mar 6, 2026Updated 4 months ago
- Microbiome-based disease prediction with multimodal variational information bottlenecks, Grazioli et al., PLOS Computational Biology 2022☆25Apr 12, 2022Updated 4 years ago
- Guide to processing raw LCMS metabolomic and lipidomic data using MS-DIAL, followed by data pre-processing and secondary annotation (of m…☆26Feb 5, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Workshop for NGS'18 conference, Barcelona 2018☆24Nov 22, 2018Updated 7 years ago
- Robust Aitchison PCA from sparse count data☆37Aug 17, 2022Updated 3 years ago
- ☆19Mar 8, 2026Updated 4 months ago
- Phylogenetic Isometric Log Ratio☆19Apr 1, 2026Updated 3 months ago
- This is for Meridian (Traditional Chinese Medicine conception) prediction by machining learning method.☆12Sep 30, 2019Updated 6 years ago
- Semi-parametric Rank-Based Correlation and Partial Correlation Estimation for Quantitative Microbiome Data☆23May 16, 2026Updated 2 months ago
- Deep representation learning for disease prediction based on microbiome data☆65Apr 21, 2023Updated 3 years ago
- Microbial community-scale metabolic modeling predicts personalized short-chain-fatty-acid production profiles in the human gut☆10Jun 25, 2024Updated 2 years ago
- Deep Generative Models: Diffusion Models for Molecule Generation☆10Jun 17, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆10Feb 21, 2022Updated 4 years ago
- ☆13Jul 6, 2022Updated 4 years ago
- Functions for compositional analysis of high throughput sequencing☆29Dec 8, 2023Updated 2 years ago
- Scripts for reproducing results shown in Gupta VK et al. "A Predictive Index for Health Status using Species-level Gut Microbiome Profili…☆37Sep 23, 2020Updated 5 years ago
- mbImpute: an accurate and robust imputation method for microbiome data☆13Aug 19, 2021Updated 4 years ago
- MIMIX: a Bayesian Mixed-Effects Model for Microbiome Data from Designed Experiments☆11Jul 9, 2020Updated 6 years ago
- Scalable tumor phylogeny inference and validation from single-cell RNA or DNA data☆14Dec 24, 2023Updated 2 years ago
- The seqtime R package provides functions to analyse sequencing data time series and to simulate community dynamics☆20Dec 9, 2022Updated 3 years ago
- ☆16Nov 5, 2021Updated 4 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Produce scientific figures in R that look exactly how you want☆18Jan 17, 2026Updated 6 months ago
- 中医药术语识别,使用CNN-BILSTM-CRF模型对9000条训练数据和1000条测试数据进行处理,最终测试数据正确率为90+%。为方便使用,使用Tkinter对模型进行封装使用☆12Feb 21, 2020Updated 6 years ago
- TensorFlow-Implementation of Deep Archetypal Analysis☆12Aug 4, 2021Updated 4 years ago
- Fit LOg-RAtio Lasso regression for compositional covariates☆16Jul 2, 2026Updated 3 weeks ago
- ☆28Feb 27, 2024Updated 2 years ago
- An R package for learning log-ratio biomarkers from high-throughput sequencing data.☆23Mar 31, 2023Updated 3 years ago
- HTML Table with Group By functionality Implemented using Facebook react.js☆10Aug 1, 2016Updated 9 years ago
- A logistic regression model for testing differential abundance in compositional microbiome data☆13Jul 25, 2023Updated 3 years ago
- Microbiome analysis☆58Jun 18, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A machine learning-based tool for predicting metabolic modules in incomplete bacterial genomes.☆23Aug 14, 2025Updated 11 months ago
- 新型冠状病毒肺炎防疫指南☆16Mar 5, 2020Updated 6 years ago
- NRPSpredictor2 is a program to predict the specificity of bacterial and fungal adenylation domains.☆11Oct 7, 2019Updated 6 years ago
- Official repository of "Beyond Spatial Frequency: Pixel-wise Temporal Frequency-based Deepfake Video Detection" [ICCV 2025]☆21Jan 17, 2026Updated 6 months ago
- ☆19May 15, 2023Updated 3 years ago
- Benchmarking deep learning models generating molecules in 3D☆19Apr 12, 2025Updated last year
- Phylogenetic Organization of Metagenomic Signals (POMS)☆18Dec 19, 2022Updated 3 years ago