Alternatives and similar repositories for RaMP-DB:

Users that are interested in RaMP-DB are comparing it to the libraries listed below

• kwanjeeraw / grinn
  a Graph database and R package for omic data integration
  ☆20Updated 8 years ago
• kwanjeeraw / metabox
  a toolbox for metabolomic data analysis, visualization and ‘omic’ integration
  ☆13Updated 6 years ago
• WMBEdmands / MetMSLine
  R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software
  ☆10Updated 7 years ago
• seandavi / wdlRunR
  Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
  ☆34Updated 3 years ago
• Nextflow4Metabolomics / nextflow4ms-dial
  Nextflow-powered MS-DIAL
  ☆10Updated 3 months ago
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆20Updated 10 months ago
• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆44Updated this week
• BgeeDB / BgeeDB_R
  Source code of the R packge BgeeDB to use data from the Bgee database
  ☆16Updated 3 months ago
• gexijin / iDEP-old-version
  iDEP: integrated Differential Expression & Pathway analysis
  ☆15Updated 6 years ago
• waldronlab / GSEABenchmarkeR
  Reproducible GSEA Benchmarking
  ☆13Updated this week
• rwehrens / BatchCorrMetabolomics
  Supplementary material for the paper "Improved batch correction in untargeted MS-based metabolomics" by R. Wehrens, et al. Metabolomics, …
  ☆15Updated 6 years ago
• lindsayrutter / bigPint
  Bioconductor package that makes BIG data pint-sized.
  ☆21Updated last year
• dgrapov / CTSgetR
  R interface to Chemical Translation Service (CTS)
  ☆14Updated 9 months ago
• csoneson / iCOBRA
  Interactive benchmarking of ranking and assignment methods
  ☆16Updated 3 weeks ago
• SamGG / ropls
  ☆10Updated 6 years ago
• WandeRum / MVI-evaluation
  Missing value imputation and evaluation, especially for metabolomics data sets
  ☆19Updated 6 years ago
• b2slab / FELLA
  FELLA: an R package for Metabolomics data enrichment through diffusion
  ☆22Updated 4 years ago
• facilebio / FacileAnalysis
  Modular & interactive analysis components for bioinformatics
  ☆17Updated last week
• leekgroup / recount
  R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
  ☆41Updated 4 months ago
• federicomarini / ideal
  Interactive Differential Expression AnaLysis - DE made accessible and reproducible
  ☆29Updated last week
• lcolladotor / derfinder
  Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches
  ☆43Updated 4 months ago
• ncats / RaMP-DB
  ☆33Updated last month
• SilasK / ipath3
  Python wrapper for ipath3
  ☆10Updated last year
• lianos / sparrow
  Take command of your set enrichment analyses.
  ☆21Updated this week
• yan-cri / DEApp
  DEAPP shiny App
  ☆30Updated 2 years ago
• biswapriyamisra / metabolomics
  Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016
  ☆12Updated 5 years ago
• jsychong / MetaboAnalystR
  ☆10Updated 5 years ago
• gschofl / reutils
  Talk to the NCBI EUtils
  ☆22Updated 4 years ago
• lgeistlinger / EnrichmentBrowser
  Seamless navigation through combined results of set-based and network-based enrichment analysis
  ☆20Updated 2 months ago
• unistbig / netGO
  R/Shiny package for network-integrated pathway enrichment analysis
  ☆14Updated 4 years ago