☆17Apr 19, 2021Updated 4 years ago
Alternatives and similar repositories for RaMP-DB
Users that are interested in RaMP-DB are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Mar 7, 2020Updated 6 years ago
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆16Apr 19, 2017Updated 8 years ago
- Direct RNA publication scripts☆11Sep 20, 2017Updated 8 years ago
- This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…☆16Jan 21, 2021Updated 5 years ago
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated last year
- A Tool for automated Optimization of XCMS Parameters☆34Nov 27, 2022Updated 3 years ago
- ☆12Jan 16, 2025Updated last year
- a toolbox for metabolomic data analysis, visualization and ‘omic’ integration☆13Jun 21, 2018Updated 7 years ago
- ☆38Jan 14, 2026Updated 2 months ago
- Course materials☆13Jan 4, 2026Updated 2 months ago
- R Interface to the ClassyFire REST API☆12Feb 21, 2025Updated last year
- R Interface to the Metabolights REST API☆11Aug 19, 2025Updated 7 months ago
- Interactive package for Short AsyNchronous Time-series Analysis (SANTA) in R, implemented in Shiny☆11Mar 6, 2024Updated 2 years ago
- Lab tasks for the course on "Data Engineering for Machine Learning"☆10May 1, 2023Updated 2 years ago
- Metabolomics Tools for Galaxy☆21Nov 22, 2016Updated 9 years ago
- R package MKmisc☆12Sep 10, 2025Updated 6 months ago
- Nextflow-powered MS-DIAL☆12Jan 13, 2025Updated last year
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- The mwtab package is a Python library that facilitates reading and writing files in mwTab format used by the Metabolomics Workbench for a…☆12Jan 20, 2026Updated 2 months ago
- ☆16Jun 9, 2025Updated 9 months ago
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Oct 17, 2018Updated 7 years ago
- Annotation of in source LC/MS data☆12Oct 19, 2024Updated last year
- Visualization of multiple tandem mass spectrometry data☆10Jun 15, 2020Updated 5 years ago
- The is mostly a wrapper tool using phyloseq and microbiome R packages.☆32Nov 23, 2022Updated 3 years ago
- ☆13Nov 5, 2024Updated last year
- RawQuant is a Python package for extracting scan meta data and quantification values from Thermo .raw files.☆11Jan 4, 2019Updated 7 years ago
- Model-based Integration of Metabolite Observations and Species Abundances☆24Feb 21, 2020Updated 6 years ago
- Zero-Inflated Beta Random Effect model☆31Mar 6, 2026Updated 2 weeks ago
- Rocker image for metabolomics data analysis☆13Oct 25, 2025Updated 4 months ago
- A collection of common mz values found in mass spectrometry.☆20Jun 13, 2024Updated last year
- R package for MetFrag☆24Sep 25, 2017Updated 8 years ago
- Relaunch of the initial MetFrag project.☆19Mar 9, 2026Updated 2 weeks ago
- Slides and other materials for club meetings☆17Jun 26, 2022Updated 3 years ago
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆21Feb 14, 2021Updated 5 years ago
- A customizable lightweight Grad-CAM implementation☆16Nov 30, 2019Updated 6 years ago
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆45Apr 1, 2025Updated 11 months ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11Oct 8, 2021Updated 4 years ago
- ReproZip for the Preservation of Web Applications☆17May 6, 2024Updated last year
- Supplementary material for the paper "Improved batch correction in untargeted MS-based metabolomics" by R. Wehrens, et al. Metabolomics, …☆15Nov 13, 2018Updated 7 years ago