Mathelab / RaMP-DB

Related projects ⓘ

Alternatives and complementary repositories for RaMP-DB

• kwanjeeraw / grinn
  a Graph database and R package for omic data integration
  ☆20Updated 8 years ago
• kwanjeeraw / metabox
  a toolbox for metabolomic data analysis, visualization and ‘omic’ integration
  ☆13Updated 6 years ago
• ahmohamed / lipidr
  Data Mining and Analysis of Lipidomics datasets in R
  ☆29Updated last year
• ncats / RaMP-DB
  ☆29Updated this week
• WandeRum / MVI-evaluation
  Missing value imputation and evaluation, especially for metabolomics data sets
  ☆18Updated 6 years ago
• waldronlab / GSEABenchmarkeR
  Reproducible GSEA Benchmarking
  ☆13Updated 3 weeks ago
• WMBEdmands / MetMSLine
  R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software
  ☆10Updated 7 years ago
• seandavi / wdlRunR
  Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
  ☆34Updated 3 years ago
• rwehrens / BatchCorrMetabolomics
  Supplementary material for the paper "Improved batch correction in untargeted MS-based metabolomics" by R. Wehrens, et al. Metabolomics, …
  ☆15Updated 6 years ago
• rformassspectrometry / QFeatures
  Quantitative features for mass spectrometry data
  ☆25Updated last month
• b2slab / FELLA
  FELLA: an R package for Metabolomics data enrichment through diffusion
  ☆21Updated 3 years ago
• lgatto / rols
  An R package to query EBI's Ontology Lookup Service (OLS)
  ☆11Updated 6 months ago
• SamGG / ropls
  ☆9Updated 6 years ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆27Updated 4 months ago
• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆33Updated 3 years ago
• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆44Updated last week
• statOmics / MSqRob
  Robust statistical inference for quantitative LC-MS proteomics
  ☆33Updated last year
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆19Updated 4 months ago
• joannawolthuis / MetaboShiny
  Repository for MetaboShiny, a novel R and RShiny based metabolomics data analysis package.
  ☆16Updated 2 months ago
• cmap / morpheus.R
  R interface to morpheus.js heatmap widget
  ☆37Updated 4 years ago
• rformassspectrometry / MsCoreUtils
  Core Utils for Mass Spectrometry Data
  ☆16Updated last month
• ipb-halle / MetFragR
  R package for MetFrag
  ☆24Updated 7 years ago
• Viant-Metabolomics / Galaxy-M
  Metabolomics Tools for Galaxy
  ☆21Updated 8 years ago
• pcastellanoescuder / POMA
  Omics Data Analysis Tools
  ☆11Updated this week
• waldronlab / SingleCellMultiModal
  Single Cell multimodal data scripts for downloading datasets
  ☆17Updated 3 weeks ago
• brennanpincardiff / drawProteins
  Creating package to draw proteins from Uniprot API
  ☆34Updated 8 months ago
• lindsayrutter / bigPint
  Bioconductor package that makes BIG data pint-sized.
  ☆20Updated 9 months ago
• broadinstitute / protigy
  Proteomics Toolset for Integrative Data Analysis
  ☆22Updated last year
• yan-cri / DEApp
  DEAPP shiny App
  ☆28Updated 2 years ago
• biswapriyamisra / metabolomics
  Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016
  ☆12Updated 4 years ago