single cell recurrence based variant analysis
☆12Dec 13, 2022Updated 3 years ago
Alternatives and similar repositories for RESA
Users that are interested in RESA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- LongSom tool for long-reads☆13May 20, 2025Updated last year
- mapping somatic variants to cell barcodes in scRNA-Seq data☆11Sep 21, 2026Updated last month
- Single-cell Iso Prep☆16Oct 28, 2023Updated 2 years ago
- Single cell isoform heterogeneity and differential alternative splicing analysis☆14Sep 14, 2025Updated last year
- Supplementary data for Petti, et al 2019 scRNA mutation publication☆16Feb 1, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆35Jun 7, 2019Updated 7 years ago
- processes GoT amplicon data and generates a table of metrics☆32Jun 24, 2022Updated 4 years ago
- ☆12Aug 8, 2024Updated 2 years ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆16Jul 5, 2023Updated 3 years ago
- ☆13Jul 9, 2026Updated 3 months ago
- Analysis pipeline used to benchmark scRNA-seq copy number variant callers☆17May 17, 2026Updated 5 months ago
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆16Apr 28, 2025Updated last year
- A tool for detecting somatic variants in single cell data☆229Sep 15, 2024Updated 2 years ago
- Pipeline to detect HLA disruption from WES and RNAseq data☆23Feb 17, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Interactive visualisation of CellphoneDB results☆13Jan 15, 2025Updated last year
- ☆10Sep 2, 2024Updated 2 years ago
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Mar 4, 2025Updated last year
- Finding the causality in biological pathways☆14Jul 12, 2023Updated 3 years ago
- ☆18Sep 1, 2023Updated 3 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆27Oct 17, 2024Updated 2 years ago
- Mutation detection using GATK4 best practices and latest RNA editing filters resources. Works with both Hg38 and Hg19☆79Jan 13, 2026Updated 9 months ago
- Easily Process a Batch of Cox Models☆23Jul 26, 2025Updated last year
- Minimal scripts to reproduce the RADICL-seq analysis of the Nature Communications manuscript☆11Jan 30, 2020Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- SNV calling from single cell sequencing☆119Nov 11, 2024Updated last year
- Displaying Strava stats on a Inky Impressions e-ink display☆13Jul 8, 2025Updated last year
- ImmunoVerse: A pan-cancer atlas of therapeutic T cell targets☆14Updated this week
- ☆14Dec 15, 2019Updated 6 years ago
- A tool for sample swap identification in high throughput sequencing studies☆10Mar 4, 2025Updated last year
- Building a Singularity image of Polysolver☆10Dec 13, 2019Updated 6 years ago
- Isoform Identification and Quantification via Long Read RNA-Seq☆17Updated this week
- scSNV Mapping tool for 10X Single Cell Data☆26Dec 19, 2025Updated 10 months ago
- Get gene sets for gene enrichment analysis (GEA)☆12Jul 27, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- MTAE-based 5UTR design model☆12Jan 23, 2024Updated 2 years ago
- ☆14Apr 14, 2026Updated 6 months ago
- ☆19Jul 30, 2022Updated 4 years ago
- ☆12Sep 24, 2025Updated last year
- Pipeline for RNA and DNA integrated analysis for somatic mutation detection☆13Oct 16, 2026Updated last week
- Efficient genotyping bi-allelic SNPs on single cells☆172Sep 29, 2026Updated 3 weeks ago
- HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signals☆11Aug 25, 2020Updated 6 years ago