Alternatives and similar repositories for DeconTools

Users that are interested in DeconTools are comparing it to the libraries listed below

• smith-chem-wisc / mzLib
  Library for mass spectrometry projects
  ☆26Updated this week
• Roestlab / DIAlignR
  This is a R package for alignment of DIA mass-spec data
  ☆12Updated 4 years ago
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆20Updated last year
• MatteoLacki / opentims_bruker_bridge
  DLL and SO from Bruker.
  ☆12Updated 2 years ago
• smith-chem-wisc / FlashLFQ
  Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics
  ☆21Updated last month
• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆49Updated 6 months ago
• dbaileychess / CSMSL
  C# Mass Spectrometry Library
  ☆37Updated 3 years ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆42Updated last year
• zhengfj1994 / MRM-Ion_Pair_Finder
  Defined MRM transitions from untargeted metabolomics data
  ☆10Updated last year
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆12Updated 4 years ago
• Noble-Lab / Carafe
  High quality in silico spectral library generation for data-independent acquisition proteomics
  ☆16Updated 2 weeks ago
• YuanyueLi / group-dia
  Group-DIA, a software for analyzing multiple DIA data files
  ☆13Updated 8 years ago
• nathaniel-mahieu / mz.unity
  mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data
  ☆14Updated 9 years ago
• mafreitas / tdf2mzml
  ☆26Updated last year
• kusterlab / universal_spectrum_explorer
  ☆15Updated 3 years ago
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• kevinkovalchik / RawTools
  RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…
  ☆65Updated 2 years ago
• PNNL-Comp-Mass-Spec / Informed-Proteomics
  Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data
  ☆31Updated 2 years ago
• MatteoLacki / timspy
  ☆20Updated 4 years ago
• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago
• zhengfj1994 / MetEx
  MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.
  ☆16Updated last year
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆48Updated 6 months ago
• HUPO-PSI / psi-ms-CV
  HUPO-PSI mass spectrometry CV
  ☆33Updated 2 weeks ago
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆24Updated 4 years ago
• chhh / batmass
  Mass spectrometry data visualization
  ☆36Updated 4 years ago
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆15Updated 8 years ago
• shuzhao-li-lab / asari
  asari, metabolomics data preprocessing
  ☆51Updated 3 weeks ago
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆28Updated 2 months ago
• fgcz / rawrr
  Access Orbitrap data in R lang using C# .NET assembly - bioconductor package
  ☆57Updated last month