mhoopmann / mstoolkitLinks
Automatically exported from code.google.com/p/mstoolkit
☆28Updated 6 months ago
Alternatives and similar repositories for mstoolkit
Users that are interested in mstoolkit are comparing it to the libraries listed below
Sorting:
- Open-source C++ and Python module for opening binary timsTOF data files.☆49Updated 3 months ago
- ☆13Updated last year
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆31Updated 6 months ago
- High quality in silico spectral library generation for data-independent acquisition proteomics☆16Updated last month
- Some hopefully useful tools for mass spectrometry applied to proteomics☆53Updated 3 years ago
- ☆24Updated 2 years ago
- Streamlining Mass Spectrometry Data Visualization with Pandas☆20Updated 2 weeks ago
- ☆22Updated 4 years ago
- Automatically exported from code.google.com/p/kojak-ms☆13Updated 5 months ago
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Updated 3 years ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆45Updated 6 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆48Updated 6 months ago
- Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.☆45Updated 3 years ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆81Updated last year
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 3 years ago
- Democratizing ML in proteomics☆43Updated last month
- Rescoring and spectral library generation pipeline for proteomics.☆49Updated this week
- Instrument Application Programming Interface☆51Updated last week
- A tool for summarizing open search results☆16Updated last week
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆22Updated 2 months ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆90Updated last month
- Deep learning framework for proteomics☆132Updated 3 weeks ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated 3 weeks ago
- modular & open DIA search☆75Updated last week
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆70Updated this week
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆54Updated this week
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆48Updated last week
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆86Updated last month
- A python package for fast post translational modification localization, powered by Cython.☆19Updated last year
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆59Updated last month