phenomecentre / peakPantheRView external linksLinks
On-instrument and post-acquisition targeted feature extraction
☆13Sep 27, 2025Updated 4 months ago
Alternatives and similar repositories for peakPantheR
Users that are interested in peakPantheR are comparing it to the libraries listed below
Sorting:
- The nPYc-Toolbox defines objects for representing, and implements functions to manipulate and display, metabolic profiling datasets.☆25Aug 8, 2025Updated 6 months ago
- R package for MetFrag☆24Sep 25, 2017Updated 8 years ago
- Tool for reliability assessment of omics peprocessing☆11Jan 13, 2026Updated last month
- Compile Mass Spectral Libraries from Various Sources☆17May 3, 2024Updated last year
- GC/LC-MS data analysis for environmental science☆17May 20, 2025Updated 8 months ago
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆18Nov 14, 2023Updated 2 years ago
- ☆16Jul 20, 2022Updated 3 years ago
- A collection of common mz values found in mass spectrometry.☆20Jun 13, 2024Updated last year
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated last year
- An R package for non-targeted LC-MS metabolomics☆20Oct 31, 2025Updated 3 months ago
- R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox: An extensive set of data (pre-)processing and analysis m…☆11May 21, 2025Updated 8 months ago
- Single sample pathway analysis tools for omics data☆13Nov 9, 2024Updated last year
- Defined MRM transitions from untargeted metabolomics data☆11Nov 13, 2023Updated 2 years ago
- Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis☆11May 6, 2025Updated 9 months ago
- Convert MSP files into a database☆10May 4, 2021Updated 4 years ago
- Metabolomics experimental design, sample metadata configuration, and sample data acquisition.☆11Jun 28, 2018Updated 7 years ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆13Jan 30, 2026Updated 2 weeks ago
- Toolkit for untargeted metabolomics profiling☆13Aug 25, 2025Updated 5 months ago
- QC systems for metabolomics studies☆11Sep 17, 2025Updated 4 months ago
- Annotation of in source LC/MS data☆12Oct 19, 2024Updated last year
- A set of metabolomics tools for use in Galaxy☆11Sep 2, 2022Updated 3 years ago
- Shiny app for retention time prediction☆10Dec 1, 2025Updated 2 months ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Sep 6, 2022Updated 3 years ago
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆31Aug 3, 2024Updated last year
- R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.☆17Updated this week
- R Interface to the ClassyFire REST API☆12Feb 21, 2025Updated 11 months ago
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆34Aug 19, 2021Updated 4 years ago
- The tools that constitute a nontargeted LCMS metabolomics data processing pipeline, created and used by the Broad Institute Metabolomics …☆13Nov 21, 2025Updated 2 months ago
- Mass spectral library manager☆13Apr 9, 2020Updated 5 years ago
- A Tool for automated Optimization of XCMS Parameters☆34Nov 27, 2022Updated 3 years ago
- Organic/biological mass spectrometry data analysis (development version).☆32Jan 27, 2026Updated 2 weeks ago
- Rocker image for metabolomics data analysis☆13Oct 25, 2025Updated 3 months ago
- Code associated with the manuscript: Deep Neural Networks for Classification of LC-MS Spectral Peaks☆14Jan 11, 2021Updated 5 years ago
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- ☆15May 30, 2025Updated 8 months ago
- 5-day workshop on Metabolomics and Data Analysis☆18Sep 1, 2019Updated 6 years ago
- Retip - Retention Time prediction for metabolomics☆32Jun 6, 2024Updated last year
- Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.☆17May 8, 2024Updated last year
- High level functionality to support and simplify metabolomics data annotation.☆19Feb 5, 2026Updated last week