Alternatives and similar repositories for peakPantheR

Users that are interested in peakPantheR are comparing it to the libraries listed below

• ipb-halle / MetFragR
  R package for MetFrag
  ☆24Updated 7 years ago
• mjhelf / Metaboseek
  Interactive software to analyze and browse mass spectrometry data
  ☆21Updated last year
• cbroeckl / RAMClustR
  Assigning precursor-product ion relationships in indiscriminant MS/MS data
  ☆12Updated last month
• stanstrup / QC4Metabolomics
  QC systems for metabolomics studies
  ☆10Updated 3 weeks ago
• KujawinskiLaboratory / Autotuner
  This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…
  ☆16Updated 4 years ago
• jorainer / SpectraTutorials
  These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconduc…
  ☆21Updated 9 months ago
• sneumann / CAMERA
  This is the git repository matching the Bioconductor package CAMERA: Collection of annotation related methods for mass spectrometry data
  ☆11Updated 3 weeks ago
• fgcz / rawDiag
  Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package
  ☆36Updated last year
• stanstrup / PredRet
  Shiny app for retention time prediction
  ☆9Updated 5 years ago
• wilsontom / msconverteR
  Create .mzML files through the R Console
  ☆11Updated 3 years ago
• QizhiSu / mspcompiler
  Compile Mass Spectral Libraries from Various Sources
  ☆17Updated last year
• rformassspectrometry / MsCoreUtils
  Core Utils for Mass Spectrometry Data
  ☆17Updated 2 months ago
• yguitton / metaMS
  data processing for MS-based metabolomics
  ☆15Updated 6 months ago
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆20Updated 11 months ago
• rwehrens / BatchCorrMetabolomics
  Supplementary material for the paper "Improved batch correction in untargeted MS-based metabolomics" by R. Wehrens, et al. Metabolomics, …
  ☆15Updated 6 years ago
• hhabra / metabCombiner
  metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation
  ☆11Updated last year
• rformassspectrometry / MetaboAnnotation
  High level functionality to support and simplify metabolomics data annotation.
  ☆16Updated last week
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆18Updated last year
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆29Updated 10 months ago
• yufree / pmd
  Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis
  ☆10Updated last month
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆27Updated this week
• jaspershen / metID
  Construct database and identify metabolites.
  ☆5Updated 2 years ago
• OrgMassSpec / OrgMassSpecR
  Organic/biological mass spectrometry data analysis (development version).
  ☆30Updated 7 years ago
• respiratory-immunology-lab / metabolome-lipidome-MSDIAL
  Guide to processing raw LCMS metabolomic and lipidomic data using MS-DIAL, followed by data pre-processing and secondary annotation (of m…
  ☆16Updated last year
• wkumler / RaMS
  R-based access to Mass-Spectrometry data
  ☆24Updated 5 months ago
• WandeRum / MVI-evaluation
  Missing value imputation and evaluation, especially for metabolomics data sets
  ☆18Updated 6 years ago
• schymane / RChemMass
  Various Cheminformatic, Curation and Mass Spectrometry Functions
  ☆14Updated 4 years ago
• rformassspectrometry / MetaboCoreUtils
  Core utilities for metabolomics.
  ☆9Updated 3 weeks ago
• idslme / IDSL.IPA
  Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…
  ☆13Updated 2 years ago
• ZhuMSLab / DecoMetDIA
  ☆11Updated 2 years ago