cwenger / Morpheus

Related projects: ⓘ

• smith-chem-wisc / FlashLFQ
  Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics
  ☆19Updated 2 months ago
• ursgal / ursgal
  Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis
  ☆42Updated 6 months ago
• smith-chem-wisc / mzLib
  Library for mass spectrometry projects
  ☆26Updated last week
• statisticalbiotechnology / triqler
  The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code
  ☆19Updated 2 months ago
• metaspace2020 / metaspace
  Cloud engine and platform for metabolite annotation for imaging mass spectrometry
  ☆47Updated this week
• compomics / moFF
  A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file
  ☆33Updated 3 years ago
• PNNL-Comp-Mass-Spec / Informed-Proteomics
  Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data
  ☆29Updated last year
• optimusmoose / jsms
  A modular JavaScript viewer for mass spectrometry data
  ☆12Updated 2 years ago
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆22Updated 3 years ago
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆41Updated 2 weeks ago
• HUPO-PSI / psi-ms-CV
  HUPO-PSI mass spectrometry CV
  ☆26Updated last week
• mobiusklein / ms_deisotope
  A library for deisotoping and charge state deconvolution of complex mass spectra
  ☆33Updated 2 weeks ago
• statisticalbiotechnology / diffacto
  ☆13Updated 6 months ago
• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆26Updated 8 months ago
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆29Updated 4 months ago
• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆41Updated 11 months ago
• smith-chem-wisc / MetaMorpheus
  Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities
  ☆90Updated this week
• jessegmeyerlab / proteomics-tutorial
  ☆51Updated 4 months ago
• gtluu / timsconvert
  ☆29Updated this week
• msproteomicstools / msproteomicstools
  Some hopefully useful tools for mass spectrometry applied to proteomics
  ☆52Updated 2 years ago
• HUPO-PSI / mzIdentML
  Repository for mzIdentML and the corresponding examples
  ☆23Updated 2 months ago
• mfitzp / padua
  Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)
  ☆22Updated last year
• fickludd / dinosaur
  Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.
  ☆41Updated 2 years ago
• bigbio / quantms
  Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…
  ☆29Updated last week
• MannLabs / directlfq
  Fast and accurate label-free quantification for small and very large numbers of proteomes
  ☆37Updated 2 weeks ago
• CCprofiler / CCprofiler
  Analysis of co-fractionation MS datasets
  ☆10Updated 2 years ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆27Updated 2 months ago
• msdk / msdk
  MSDK source code repository
  ☆39Updated last year
• compomics / DeepLC
  DeepLC: Retention time prediction for (modified) peptides using Deep Learning.
  ☆52Updated this week
• MannLabs / timsrust
  ☆22Updated 2 weeks ago