Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis
☆12Apr 22, 2026Updated last month
Alternatives and similar repositories for pmd
Users that are interested in pmd are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GC/LC-MS data analysis for environmental science☆18Apr 9, 2026Updated 2 months ago
- MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS☆16Jan 8, 2026Updated 5 months ago
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆36Feb 12, 2026Updated 4 months ago
- ☆27Mar 20, 2026Updated 2 months ago
- DeepMASS2 is a cross-platform GUI software tool, which enables deep-learning based metabolite annotation via semantic similarity analysis…☆14Jan 22, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This package is a python warpper for CFM-ID☆13Aug 26, 2022Updated 3 years ago
- data processing for MS-based metabolomics☆15May 28, 2026Updated 2 weeks ago
- A database of In-Silico predicted MS/MS spectrum of Natural Products☆15Sep 24, 2022Updated 3 years ago
- Mass spectral library manager☆13Apr 9, 2020Updated 6 years ago
- Group-DIA, a software for analyzing multiple DIA data files☆13Dec 5, 2016Updated 9 years ago
- This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…☆46Mar 31, 2026Updated 2 months ago
- ☆15Jun 3, 2021Updated 5 years ago
- ☆14Dec 2, 2024Updated last year
- sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java☆58Aug 1, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This repository contains the generalized scripts necessary to perform the ecological analyses detailed within the manuscript titled, "Uni…☆19Nov 2, 2020Updated 5 years ago
- Metabolomics experimental design, sample metadata configuration, and sample data acquisition.☆11Jun 28, 2018Updated 7 years ago
- MicrobeRX☆17Aug 11, 2025Updated 10 months ago
- OpenBabel wrapper package for R☆10Mar 12, 2026Updated 3 months ago
- Low level infrastructure to handle MS spectra☆46Updated this week
- ☆16Jul 20, 2022Updated 3 years ago
- The nPYc-Toolbox defines objects for representing, and implements functions to manipulate and display, metabolic profiling datasets.☆25Updated this week
- A collection of common mz values found in mass spectrometry.☆21Jun 13, 2024Updated 2 years ago
- This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…☆16Jan 21, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Convert MSP files into a database☆10May 4, 2021Updated 5 years ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆20Jan 24, 2024Updated 2 years ago
- Interactive software to analyze and browse mass spectrometry data☆21Jul 3, 2025Updated 11 months ago
- Defined MRM transitions from untargeted metabolomics data☆11Nov 13, 2023Updated 2 years ago
- On-instrument and post-acquisition targeted feature extraction☆13Apr 24, 2026Updated last month
- A set of metabolomics tools for use in Galaxy☆11Sep 2, 2022Updated 3 years ago
- Annotation of in source LC/MS data☆12Oct 19, 2024Updated last year
- R Interface to the ClassyFire REST API☆14May 20, 2026Updated 3 weeks ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆14May 28, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox: An extensive set of data (pre-)processing and analysis m…☆11Apr 16, 2026Updated last month
- A Tool for automated Optimization of XCMS Parameters☆34Nov 27, 2022Updated 3 years ago
- PyMassSpec extension for searching mass spectra using NIST's Mass Spectrum Search Engine.☆23May 19, 2026Updated 3 weeks ago
- ☆16May 27, 2026Updated 2 weeks ago
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Oct 17, 2018Updated 7 years ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆32Jan 5, 2025Updated last year
- Rocker image for metabolomics data analysis☆13Oct 25, 2025Updated 7 months ago