Repository for MetaboShiny, a novel R and RShiny based metabolomics data analysis package.
☆17Feb 13, 2026Updated 3 weeks ago
Alternatives and similar repositories for MetaboShiny
Users that are interested in MetaboShiny are comparing it to the libraries listed below
Sorting:
- Defined MRM transitions from untargeted metabolomics data☆11Nov 13, 2023Updated 2 years ago
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated last year
- Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis☆11May 6, 2025Updated 10 months ago
- R Interface to the Metabolights REST API☆11Aug 19, 2025Updated 6 months ago
- Lithops-based Serverless implementation of the METASPACE spatial metabolomics annotation pipeline☆12Jul 6, 2023Updated 2 years ago
- QC systems for metabolomics studies☆11Sep 17, 2025Updated 5 months ago
- R for Mass Spectrometry documentation☆14Nov 19, 2025Updated 3 months ago
- A package to cluster and visualise MS/MS spectral data☆11Feb 26, 2021Updated 5 years ago
- Notebooks in computational metabolomics☆15Feb 3, 2025Updated last year
- Package for analyzing MS with Python☆10Jan 11, 2018Updated 8 years ago
- ☆28Nov 30, 2023Updated 2 years ago
- Mass spectral library manager☆13Apr 9, 2020Updated 5 years ago
- Guide to processing raw LCMS metabolomic and lipidomic data using MS-DIAL, followed by data pre-processing and secondary annotation (of m…☆24Feb 5, 2024Updated 2 years ago
- metaX: a flexible and comprehensive software for processing omics data.☆26Jun 16, 2023Updated 2 years ago
- Rocker image for metabolomics data analysis☆13Oct 25, 2025Updated 4 months ago
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- High level functionality to support and simplify metabolomics data annotation.☆19Mar 2, 2026Updated last week
- Group-DIA, a software for analyzing multiple DIA data files☆13Dec 5, 2016Updated 9 years ago
- Graphical user interface for de novo sequencing of tandem mass spectra☆15Mar 11, 2024Updated last year
- Quickly find and score consensus between metabolite identifications and gene annotations☆18Nov 10, 2025Updated 3 months ago
- Web-based User-friendly Workflow for Metabolomics and Proteomics Data Analysis☆18May 3, 2023Updated 2 years ago
- Creating and using (chemical) compound databases☆19Mar 2, 2026Updated last week
- This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…☆16Jan 21, 2021Updated 5 years ago
- A toolkit for quality control & adjustment of nucleotide redundancy in bacterial pan-genome analyses☆21Feb 12, 2026Updated 3 weeks ago
- Workflow for LC-MS feature analysis and spatial mapping☆20Jul 16, 2018Updated 7 years ago
- ☆20Jul 12, 2023Updated 2 years ago
- Used to deisotope mass spectra and to detect features from mass spectrometry data using observed isotopic signatures.☆19Oct 23, 2025Updated 4 months ago
- Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data☆20Jul 6, 2023Updated 2 years ago
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆16Apr 19, 2017Updated 8 years ago
- A collection of common mz values found in mass spectrometry.☆20Jun 13, 2024Updated last year
- A MALDI Mass Spectrometry Bioinformatics Platform☆31Dec 19, 2024Updated last year
- Interactive software to analyze and browse mass spectrometry data☆21Jul 3, 2025Updated 8 months ago
- An R package for non-targeted LC-MS metabolomics☆20Oct 31, 2025Updated 4 months ago
- ☆55Apr 15, 2021Updated 4 years ago
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆24Apr 25, 2025Updated 10 months ago
- MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and cover…☆23Feb 4, 2026Updated last month
- Chemical Similarity Enrichment analysis of metabolomics datasets☆30Jul 19, 2024Updated last year
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆31Aug 3, 2024Updated last year
- Online workflow guidelines for metabolomics☆24Jan 4, 2026Updated 2 months ago