Alternatives and similar repositories for SECIMTools

Users that are interested in SECIMTools are comparing it to the libraries listed below

• Viant-Metabolomics / Galaxy-M
  Metabolomics Tools for Galaxy
  ☆21Updated 8 years ago
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆15Updated 8 years ago
• alexandrovteam / curatr
  ☆14Updated 2 years ago
• cbroeckl / RAMClustR
  Assigning precursor-product ion relationships in indiscriminant MS/MS data
  ☆14Updated last month
• madeleineernst / pyMolNetEnhancer
  ☆20Updated last year
• stanstrup / QC4Metabolomics
  QC systems for metabolomics studies
  ☆10Updated 2 weeks ago
• yufree / pmd
  Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis
  ☆10Updated last month
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆20Updated last year
• rformassspectrometry / MsCoreUtils
  Core Utils for Mass Spectrometry Data
  ☆17Updated 3 months ago
• ipb-halle / MetFragRelaunched
  Relaunch of the initial MetFrag project.
  ☆18Updated this week
• ccdmb / BioDendro
  A package to cluster and visualise MS/MS spectral data
  ☆11Updated 4 years ago
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆12Updated 3 years ago
• ZhuMSLab / DecoMetDIA
  ☆11Updated 2 years ago
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆41Updated last year
• workflow4metabolomics / tools-metabolomics
  Galaxy tools for metabolomics maintained by Workflow4Metabolomics
  ☆27Updated 2 weeks ago
• biswapriyamisra / metabolomics
  Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016
  ☆12Updated 5 years ago
• computational-chemical-biology / ChemWalker
  ☆11Updated last year
• RECETOX / galaxytools
  Set of Galaxy tool wrappers developed at RECETOX
  ☆13Updated last week
• computational-metabolomics / msPurity
  R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• computational-metabolomics / dimspy
  Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data
  ☆20Updated last year
• stanstrup / PredRet
  Shiny app for retention time prediction
  ☆9Updated 5 years ago
• biocore / q2-qemistree
  Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
  ☆31Updated 2 years ago
• nathaniel-mahieu / mz.unity
  mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data
  ☆14Updated 9 years ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆19Updated last year
• Nextflow4Metabolomics / nextflow4ms-dial
  Nextflow-powered MS-DIAL
  ☆10Updated 5 months ago
• mwang87 / GNPS_MASST
  ☆12Updated 2 months ago
• eugenemel / maven
  Maven GUI: Metabolomics Analysis and Visualization Engine
  ☆20Updated last week
• nf-core / metaboigniter
  Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
  ☆21Updated 3 weeks ago
• computational-metabolomics / beamspy
  BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)
  ☆18Updated 2 years ago