Source code and data for "Causal reasoning over knowledge graphs leveraging drug-perturbed and disease-specific transcriptomic signatures for drug discovery"
☆19Jul 3, 2024Updated last year
Alternatives and similar repositories for RPath
Users that are interested in RPath are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated last year
- NRLMFβ: Bata-distribution-rescored Neighborhood Regularized Logistic Matrix Factorization for Improving Performance of Drug–Target Intera…☆11Oct 12, 2021Updated 4 years ago
- Course project of SJTU CS3319: Foundations of Data Science, 2023 spring☆12Jun 22, 2023Updated 2 years ago
- ☆11Feb 20, 2026Updated 3 months ago
- C++ lossless and lossy mass spectrometry compression☆15Sep 16, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆15May 30, 2025Updated 11 months ago
- Mass spectral library manager☆13Apr 9, 2020Updated 6 years ago
- ☆19Jun 23, 2023Updated 2 years ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Mar 7, 2020Updated 6 years ago
- Python Data Science package for HeavyDB.☆22Apr 3, 2024Updated 2 years ago
- ☆11May 2, 2022Updated 4 years ago
- ☆15Jun 3, 2021Updated 4 years ago
- Dash HoloViews Example using Datashader and Linked Selections on the NYC Taxi Dataset☆14Dec 8, 2021Updated 4 years ago
- Quickly find and score consensus between metabolite identifications and gene annotations☆18Nov 10, 2025Updated 6 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Curated list on Deep Transformers Applications on Biology and Chemistry☆19Apr 8, 2023Updated 3 years ago
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆28Jul 1, 2024Updated last year
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆16May 8, 2026Updated last week
- R package for metabolic enzyme enrichment anaylsis☆13Oct 24, 2025Updated 6 months ago
- ☆20Jul 12, 2023Updated 2 years ago
- ☆16Jul 20, 2022Updated 3 years ago
- ☆23Dec 23, 2021Updated 4 years ago
- CODEX data processing code☆12Jul 1, 2025Updated 10 months ago
- BioLearns: Computational Biology and Bioinformatics Toolbox in Python☆12Oct 12, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆12May 16, 2023Updated 3 years ago
- Interactive software to analyze and browse mass spectrometry data☆21Jul 3, 2025Updated 10 months ago
- Elucidate and visualise a compound's mechanism of action by combining structure-based target prediction with gene expression-based causal…☆13Feb 11, 2023Updated 3 years ago
- High level functionality to support and simplify metabolomics data annotation.☆20Mar 19, 2026Updated 2 months ago
- ☆14Dec 7, 2021Updated 4 years ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆36Jul 10, 2024Updated last year
- Learn morphological states of dynamic cells☆13Apr 16, 2023Updated 3 years ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Aug 9, 2018Updated 7 years ago
- ☆14Jan 10, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A small library to provide peak picking for software processing mass spectrometry data☆23Apr 17, 2026Updated last month
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆16Apr 13, 2026Updated last month
- ARCHIVED Programmatic interface to the Berkeley Ecoinformatics Engine☆18Sep 22, 2022Updated 3 years ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆14Jan 20, 2022Updated 4 years ago
- ☆10Apr 11, 2022Updated 4 years ago
- Drug repurposing for COVID-19 using literature-based discovery☆31Sep 6, 2022Updated 3 years ago
- A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data☆25Jan 21, 2024Updated 2 years ago