NCBI-Hackathons / Virus_Detection_SRALinks
☆10Updated 7 years ago
Alternatives and similar repositories for Virus_Detection_SRA
Users that are interested in Virus_Detection_SRA are comparing it to the libraries listed below
Sorting:
- ☆17Updated 7 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 7 years ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Updated 4 years ago
- The repository keeps the files for an IPython notebook on about how to make a simple genome assembler using python☆30Updated 7 years ago
- 🍶 Genome assembly with short sequence reads☆25Updated last year
- ☆18Updated 8 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Updated 3 months ago
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆31Updated 8 months ago
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Updated 9 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- Bioinformatics pipeline for nanopore sequencing data☆11Updated 6 years ago
- Database-Integrated Genome Screening (DIGS) tool. Explore the dark genome using BLAST and a relational database.☆11Updated last year
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated 4 months ago
- full taxonomer cython repository☆22Updated 5 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- A simple tool to fix PacBio fasta/q that was not properly split into subreads☆15Updated 4 years ago
- ☆10Updated 10 years ago
- Whole Exome/Whole Genome Sequencing alignment pipeline☆28Updated last year
- Various scripts and recipes for working with nanopore data☆34Updated 9 years ago
- Software for Nanopore Analysis☆10Updated 7 years ago
- Genomic Assemblies Merger for NGS☆26Updated last year
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- Processing and analysis of data coming from Illumina sequencing machines☆10Updated last month
- ☆15Updated 7 years ago
- Updated figures for "A benchmarking of WGS-based structural variant callers" paper☆27Updated 3 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Updated 2 years ago
- fastq quality assessment and filtering tool☆18Updated 2 years ago