bkntr / brainways
Brainways
☆16Updated last week
Alternatives and similar repositories for brainways:
Users that are interested in brainways are comparing it to the libraries listed below
- How to use Aligning Big Brains and Atlases with Python☆15Updated 2 years ago
- ☆18Updated 3 years ago
- Registration to BrainGlobe atlases in napari using Elastix☆22Updated this week
- Read and write files from the BrainGlobe neuroanatomy suite☆14Updated last week
- Build unbiased anatomical templates from individual images☆11Updated 3 weeks ago
- ☆18Updated 3 years ago
- Fast, volumetric cell detection. In development.☆17Updated last week
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆29Updated last year
- Rendering anatomical heatmaps with brainrender and matplotlib☆40Updated this week
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆21Updated 2 years ago
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆21Updated last week
- Implementation of "Precise Mapping of Single Neurons by Calibrated 3D Reconstruction of Brain Slices Reveals Topographic Projection in Mo…☆14Updated 2 years ago
- Serial-section automated anatomy extension for ScanImage☆12Updated last month
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated 2 months ago
- ☆10Updated 2 years ago
- https://nutil.readthedocs.io/en/latest/☆12Updated 2 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 7 months ago
- General information, resources and dicussions for the BrainGlobe project.☆11Updated 2 months ago
- Loading and saving of image data.☆10Updated last year
- Visualise brainreg registration output☆10Updated 3 years ago
- ☆22Updated 2 months ago
- motion correction☆17Updated 2 years ago
- ABBA, controlled from python☆13Updated last month
- ☆34Updated last year
- Segmentation of anatomical structures in a common coordinate space☆32Updated this week
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated 11 months ago
- Utility to create a basic Python project structure with tests, CI etc.☆28Updated this week
- Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)☆16Updated last month
- ☆19Updated last year
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year