bkntr / brainwaysLinks
Brainways
☆18Updated last month
Alternatives and similar repositories for brainways
Users that are interested in brainways are comparing it to the libraries listed below
Sorting:
- Read and write files from the BrainGlobe neuroanatomy suite☆14Updated last week
- How to use Aligning Big Brains and Atlases with Python☆15Updated 2 years ago
- ☆18Updated 3 years ago
- Build unbiased anatomical templates from individual images☆11Updated last week
- Registration to BrainGlobe atlases in napari using Elastix☆22Updated this week
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆22Updated last week
- Anatomical space conventions made easy.☆10Updated last week
- Loading and saving of image data.☆10Updated last year
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆21Updated 3 years ago
- ☆18Updated 3 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆43Updated last week
- Visualise brainreg registration output☆10Updated 3 years ago
- Segmentation of anatomical structures in a common coordinate space☆33Updated last week
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- General information, resources and dicussions for the BrainGlobe project.☆11Updated 4 months ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated last week
- ☆10Updated 2 years ago
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆29Updated last year
- Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)☆16Updated 3 months ago
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- Implementation of "Precise Mapping of Single Neurons by Calibrated 3D Reconstruction of Brain Slices Reveals Topographic Projection in Mo…☆15Updated 2 years ago
- ☆34Updated last month
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆56Updated 6 months ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated last year
- Serial-section automated anatomy extension for ScanImage☆15Updated last week
- A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks☆96Updated last week
- Fast, volumetric cell detection. In development.☆18Updated last month
- Efficient cell detection in large images using cellfinder in napari☆22Updated last year
- ☆45Updated 5 years ago
- Activity Quantification and Analysis for molecular spatiotemporal signals☆27Updated 3 months ago