SchwarzNeuroconLab / DeepLabStreamLinks
Closed-loop behavioral experiment toolkit using pose estimation of body parts.
☆61Updated 2 years ago
Alternatives and similar repositories for DeepLabStream
Users that are interested in DeepLabStream are comparing it to the libraries listed below
Sorting:
- a module for kinematic analysis of deeplabcut outputs☆144Updated last year
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆179Updated 3 months ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆52Updated 5 months ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆195Updated last year
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 9 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated this week
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆35Updated 4 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆137Updated 4 months ago
- Histology processing☆71Updated 2 months ago
- Free, platform independent, behavior tracking software.☆142Updated 4 months ago
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆202Updated last year
- ☆52Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆78Updated 7 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆110Updated last month
- An active learning platform for expert-guided, data efficient discovery of behavior.☆63Updated 5 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆156Updated last month
- IBL core shared libraries☆64Updated last week
- Janelia Animal Behavior Detector☆81Updated 2 weeks ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆33Updated 5 months ago
- Various scripts to support deeplabcut and what to do afterwards!☆156Updated 4 months ago
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆67Updated this week
- Registration of cells across sessions.☆75Updated last year
- Code package that allows meta analyses of unsupervised behavior results☆19Updated 5 months ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 8 months ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆105Updated this week