SchwarzNeuroconLab / DeepLabStreamLinks
Closed-loop behavioral experiment toolkit using pose estimation of body parts.
☆61Updated 2 years ago
Alternatives and similar repositories for DeepLabStream
Users that are interested in DeepLabStream are comparing it to the libraries listed below
Sorting:
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆52Updated 6 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆181Updated 4 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 2 months ago
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆35Updated 4 years ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated this week
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 10 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 3 weeks ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 9 months ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆197Updated last year
- ☆52Updated last year
- a module for kinematic analysis of deeplabcut outputs☆146Updated last year
- Histology processing☆71Updated 2 months ago
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆32Updated last year
- Free, platform independent, behavior tracking software.☆143Updated 5 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆138Updated 5 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆79Updated 7 months ago
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆202Updated last year
- A modular package to control stimulation and track behaviour☆47Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆157Updated 3 weeks ago
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆106Updated this week
- "Approaches to Study Neural Circuits" course☆65Updated 11 months ago
- ☆100Updated last month
- Sample implementation of the MotionMapper behavioral analysis algorithms☆81Updated 5 years ago
- NEural MOdelS, a statistical modeling framework for neuroscience.☆111Updated last week
- IBL core shared libraries☆65Updated this week