SchwarzNeuroconLab / DeepLabStreamLinks
Closed-loop behavioral experiment toolkit using pose estimation of body parts.
☆61Updated 2 years ago
Alternatives and similar repositories for DeepLabStream
Users that are interested in DeepLabStream are comparing it to the libraries listed below
Sorting:
- miniscope analysis pipeline with interactive visualizations☆97Updated last year
- Histology processing☆72Updated last month
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 11 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last week
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆53Updated 7 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆181Updated 5 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 2 weeks ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆35Updated 4 years ago
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- ☆52Updated last year
- a module for kinematic analysis of deeplabcut outputs☆149Updated 2 years ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 3 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆139Updated last month
- Registration of cells across sessions.☆75Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- IBL core shared libraries☆66Updated this week
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated 2 months ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆33Updated 7 months ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆198Updated last year
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated this week
- Free, platform independent, behavior tracking software.☆143Updated 6 months ago
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆107Updated this week
- Browser-based NWB visualization and DANDI exploration☆62Updated last month
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 10 months ago
- a Python API to record video & system timestamps from Imaging Source USB cameras☆68Updated 2 years ago
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- "Approaches to Study Neural Circuits" course☆65Updated last year
- Janelia Animal Behavior Detector☆82Updated 2 months ago