SainsburyWellcomeCentre / lasagna
3-D imaging visualisation through slicing
☆29Updated 4 months ago
Alternatives and similar repositories for lasagna
Users that are interested in lasagna are comparing it to the libraries listed below
Sorting:
- Segmentation of anatomical structures in a common coordinate space☆32Updated last week
- CloudReg☆11Updated last year
- Brainways☆17Updated 2 weeks ago
- Serial-section automated anatomy extension for ScanImage☆12Updated last month
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆39Updated last month
- A modular package to control stimulation and track behaviour☆44Updated 6 months ago
- Geometry Processing of Conventionally Produced Mouse Brain Slice Images☆7Updated 5 years ago
- A Python toolbox for Fast Image Signal Separation Analysis, designed for Calcium Imaging data.☆32Updated last month
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- Loading and saving of image data.☆10Updated last year
- ☆8Updated 3 years ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 4 years ago
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆19Updated last week
- Live Mouse Tracker analysis☆28Updated last month
- IaC codebase for the NeuroCAAS Platform☆37Updated last year
- Read and write files from the BrainGlobe neuroanatomy suite☆14Updated last week
- motion correction☆17Updated 2 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆40Updated last week
- IBL core shared libraries☆63Updated this week
- ☆34Updated last year
- Napari plugin for working with video files.☆12Updated last week
- Fast, volumetric cell detection. In development.☆17Updated this week
- Compression, denoising and demixing of functional imaging recordings☆28Updated 6 years ago
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆22Updated last month
- Registration to BrainGlobe atlases in napari using Elastix☆22Updated last week
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated 6 months ago
- Visualise brainreg registration output☆10Updated 3 years ago
- Keras network for spike detection from calcium traces☆12Updated 4 years ago