SainsburyWellcomeCentre / lasagnaLinks
3-D imaging visualisation through slicing
☆30Updated 5 months ago
Alternatives and similar repositories for lasagna
Users that are interested in lasagna are comparing it to the libraries listed below
Sorting:
- Segmentation of anatomical structures in a common coordinate space☆33Updated 3 weeks ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆40Updated 3 months ago
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- Analyze neuroscience data in the cloud☆18Updated 9 months ago
- A Python toolbox for Fast Image Signal Separation Analysis, designed for Calcium Imaging data.☆32Updated this week
- ☆34Updated last month
- IBL core shared libraries☆63Updated this week
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- Napari plugin for working with video files.☆12Updated last month
- Brainways☆18Updated last month
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated 8 months ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆43Updated 3 weeks ago
- Live Mouse Tracker analysis☆29Updated 3 weeks ago
- ☆28Updated 11 months ago
- Functions to assess quality of spike sorting results☆34Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- ☆8Updated 3 years ago
- A modular package to control stimulation and track behaviour☆45Updated 7 months ago
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 3 years ago
- IaC codebase for the NeuroCAAS Platform☆37Updated last year
- pyqt5 dependent applications for IBL sessions☆27Updated this week
- Main repository for IBL rig code☆22Updated this week
- motion correction☆17Updated 2 years ago
- ☆52Updated 9 months ago
- ☆26Updated 2 years ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated 3 months ago
- Browser-based NWB visualization and DANDI exploration☆58Updated this week
- Serial-section automated anatomy extension for ScanImage☆14Updated last week
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 8 months ago