Alternatives and similar repositories for GuPPy

Users that are interested in GuPPy are comparing it to the libraries listed below

• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆38Updated 9 months ago
• petersaj / AP_histology
  Histology processing
  ☆66Updated last month
• ETHZ-INS / DLCAnalyzer
  R Scripts to analyze deep lab cut point data and related data
  ☆67Updated 2 years ago
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆135Updated last year
• wildrootlab / SHARCQ
  Tools to register histological section images and cell count locations to mouse brain atlas
  ☆27Updated 3 years ago
• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆103Updated 7 months ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated 10 months ago
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆147Updated last month
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆55Updated this week
• denisecailab / ezTrack
  Free, platform independent, behavior tracking software.
  ☆136Updated 3 weeks ago
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆74Updated 3 months ago
• billkarsh / SpikeGLX
  SpikeGLX recording system GUI [Neuropixels NI]
  ☆90Updated last week
• Whitlock-Group / HERBS
  ☆52Updated 10 months ago
• JingyiGF / HERBS
  ☆19Updated last year
• djamesbarker / pMAT
  Fiber Photometry Modular Analysis Tool Suite
  ☆40Updated 3 years ago
• MouseLand / facemap
  Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…
  ☆169Updated 3 months ago
• talialerner / Photometry-Analysis-Shared
  ☆11Updated 9 years ago
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆52Updated 5 months ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆94Updated 11 months ago
• leomol / FPA
  Fiber photometry analysis
  ☆22Updated 3 months ago
• dattalab / keypoint-moseq
  ☆91Updated last week
• porteralab / EZcalcium
  Calcium Data Extraction and Analysis
  ☆45Updated 2 years ago
• bahanonu / ciatah
  CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…
  ☆90Updated 8 months ago
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆28Updated last week
• bahanonu / imaging_tools
  A table containing imaging analysis tools for biology, with a focus on calcium imaging.
  ☆50Updated last year
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆126Updated 2 weeks ago
• zhuangjun1981 / WarpedVisualStim
  For displaying spherically corrected visual stimulus on a flat screen.
  ☆9Updated 6 months ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆61Updated last year
• JinghaoLu / MIN1PIPE
  A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.
  ☆60Updated last year
• deisseroth-lab / multifiber
  A GUI and library for doing multi-fiber photometry
  ☆18Updated 7 years ago