Alternatives and similar repositories for GuPPy

Users that are interested in GuPPy are comparing it to the libraries listed below

• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆138Updated 3 weeks ago
• petersaj / AP_histology
  Histology processing
  ☆67Updated 3 weeks ago
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆38Updated 10 months ago
• ETHZ-INS / DLCAnalyzer
  R Scripts to analyze deep lab cut point data and related data
  ☆67Updated 2 years ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated 11 months ago
• Whitlock-Group / HERBS
  ☆52Updated 11 months ago
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆150Updated this week
• JingyiGF / HERBS
  ☆19Updated last year
• denisecailab / ezTrack
  Free, platform independent, behavior tracking software.
  ☆138Updated last month
• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆104Updated 7 months ago
• billkarsh / SpikeGLX
  SpikeGLX recording system GUI [Neuropixels NI]
  ☆93Updated 3 weeks ago
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆76Updated 3 months ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆95Updated last year
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆109Updated this week
• djamesbarker / pMAT
  Fiber Photometry Modular Analysis Tool Suite
  ☆40Updated 4 years ago
• wildrootlab / SHARCQ
  Tools to register histological section images and cell count locations to mouse brain atlas
  ☆27Updated 3 years ago
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆56Updated 3 weeks ago
• MouseLand / rastermap
  a visualization method for neural data
  ☆235Updated 4 months ago
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆127Updated last month
• talialerner / Photometry-Analysis-Shared
  ☆11Updated 9 years ago
• porteralab / EZcalcium
  Calcium Data Extraction and Analysis
  ☆45Updated 2 years ago
• MouseLand / facemap
  Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…
  ☆173Updated 2 weeks ago
• inscopix / inscopix-cnmfe
  Algorithm for automated source extraction from 1P data
  ☆21Updated 2 years ago
• deisseroth-lab / multifiber
  A GUI and library for doing multi-fiber photometry
  ☆18Updated 7 years ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆61Updated last year
• bahanonu / imaging_tools
  A table containing imaging analysis tools for biology, with a focus on calcium imaging.
  ☆50Updated last year
• MouseLand / suite2p
  cell detection in calcium imaging recordings
  ☆396Updated last month
• nel-lab / mesmerize-core
  High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn
  ☆70Updated 2 months ago
• leomol / FPA
  Fiber photometry analysis
  ☆22Updated 4 months ago
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆65Updated last month