jbohnslav / deepethogram
☆98Updated last month
Related projects: ⓘ
- a module for kinematic analysis of deeplabcut outputs☆132Updated 9 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆49Updated last month
- ☆70Updated 2 weeks ago
- R Scripts to analyze deep lab cut point data and related data☆60Updated last year
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆25Updated 3 months ago
- Various scripts to support deeplabcut and what to do afterwards!☆141Updated 10 months ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆53Updated 3 months ago
- End-user version of the Mouse Action Recognition System (MARS)☆58Updated 5 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆154Updated last week
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆13Updated last year
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆174Updated last month
- DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.☆24Updated 6 months ago
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆189Updated 7 months ago
- AlphaTracker is a computer vision pipeline with the practical and real-time advantages , which requires minimal hardware requirements and…☆61Updated 11 months ago
- Demo code for CAPTURE and DANNCE☆27Updated 3 years ago
- Workshop material for using DeepLabCut☆138Updated 11 months ago
- Fiber Photometry Modular Analysis Tool Suite☆32Updated 3 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆34Updated last year
- ☆51Updated 3 weeks ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆52Updated last year
- Quantify user-defined behaviors.☆64Updated last week
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆47Updated 2 years ago
- Free, platform independent, behavior tracking software.☆118Updated 2 months ago
- miniscope analysis pipeline with interactive visualizations☆91Updated 2 months ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆31Updated 3 years ago
- Automatic Mobility Based Behavioral Quantification ( Forced Swim Test, Tail Suspension Test )☆14Updated 3 weeks ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆65Updated this week
- Algorithm for automated source extraction from 1P data☆19Updated last year
- Multi-probe trajectory planning in an intuitive 3D environment☆42Updated last week
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆52Updated 3 months ago