jbohnslav / deepethogramLinks
☆115Updated 3 months ago
Alternatives and similar repositories for deepethogram
Users that are interested in deepethogram are comparing it to the libraries listed below
Sorting:
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆195Updated last year
- ☆97Updated 3 weeks ago
- a module for kinematic analysis of deeplabcut outputs☆144Updated last year
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆202Updated last year
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆179Updated 3 months ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆63Updated 5 months ago
- R Scripts to analyze deep lab cut point data and related data☆67Updated 2 years ago
- Various scripts to support deeplabcut and what to do afterwards!☆156Updated 4 months ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 8 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 9 months ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆36Updated last month
- Free, platform independent, behavior tracking software.☆142Updated 4 months ago
- SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers☆341Updated this week
- Quantify user-defined behaviors.☆98Updated 3 weeks ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆33Updated 5 months ago
- End-user version of the Mouse Action Recognition System (MARS)☆75Updated last year
- a Python API to record video & system timestamps from Imaging Source USB cameras☆67Updated 2 years ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆61Updated 2 years ago
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- TRex, a fast multi-animal tracking system with markerless identification, and 2D estimation of posture and visual fields.☆107Updated last week
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆52Updated 5 months ago
- Code package that allows meta analyses of unsupervised behavior results☆19Updated 5 months ago
- Python package for streaming video from multiple cameras to disk. Features real-time compression and debayering using FFmpeg.☆46Updated 3 months ago
- DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition☆51Updated this week
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- Tools to work with Allen Inst CCF data in matlab☆142Updated 4 months ago
- ☆52Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆78Updated 7 months ago
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆52Updated last year