jbohnslav / deepethogramLinks
☆114Updated last month
Alternatives and similar repositories for deepethogram
Users that are interested in deepethogram are comparing it to the libraries listed below
Sorting:
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆193Updated last year
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆201Updated last year
- a module for kinematic analysis of deeplabcut outputs☆144Updated last year
- ☆97Updated this week
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 8 months ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆62Updated 3 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆175Updated 2 months ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆34Updated 2 weeks ago
- R Scripts to analyze deep lab cut point data and related data☆67Updated 2 years ago
- Various scripts to support deeplabcut and what to do afterwards!☆156Updated 3 months ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆60Updated 2 years ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 7 months ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆52Updated 4 months ago
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- a Python API to record video & system timestamps from Imaging Source USB cameras☆67Updated 2 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- Code package that allows meta analyses of unsupervised behavior results☆16Updated 4 months ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆30Updated 3 months ago
- End-user version of the Mouse Action Recognition System (MARS)☆75Updated last year
- Quantify user-defined behaviors.☆94Updated 2 weeks ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆68Updated 2 weeks ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Fiber Photometry Modular Analysis Tool Suite☆40Updated 4 years ago
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆51Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆132Updated 3 months ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆34Updated 4 years ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 3 weeks ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆77Updated 5 months ago
- ☆52Updated last year
- AlphaTracker is a computer vision pipeline with the practical and real-time advantages , which requires minimal hardware requirements and…☆72Updated 2 years ago