maxsonBraunLab / gopeaksLinks
Peak caller for CUT&TAG data
☆29Updated 3 years ago
Alternatives and similar repositories for gopeaks
Users that are interested in gopeaks are comparing it to the libraries listed below
Sorting:
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- An R package for time course sequencing data analysis☆20Updated 2 years ago
- binned motif enrichment analysis and visualisation☆42Updated last month
- Bead-based single-cell atac processing☆33Updated 3 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- ☆41Updated 3 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆25Updated 2 years ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- An Integrated Analysis Pipeline for Unbiased ChIP seq Analysis☆22Updated last year
- ☆24Updated this week
- An R interface to the MEME Suite☆52Updated 4 months ago
- ReMapEnrich is a R-software package to identify significantly enriched regions from ReMap catalogues or user defined catalogues. ReMapEnr…☆15Updated 3 years ago
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆22Updated 6 years ago
- Scripts to install as a Bioconda package for making workflows☆17Updated last year
- ☆23Updated 4 years ago
- A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications☆33Updated 3 years ago
- Pipeline for Cut&Tag analysis☆24Updated 6 months ago
- Motif manipulation functions for R.☆30Updated 3 weeks ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆91Updated 7 months ago
- An R package to analyze single-cell V(D)J data☆28Updated last year
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆34Updated 6 months ago
- ☆23Updated 8 months ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 7 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- ☆17Updated 6 years ago
- Analysis and visualization of RNA-Seq results☆30Updated last month
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Updated 5 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆34Updated 6 years ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago