A multi-view latent variable model with domain-informed structured sparsity for integrating noisy feature sets.
☆35Feb 10, 2026Updated 4 months ago
Alternatives and similar repositories for MuVI
Users that are interested in MuVI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The official source code to: Uncertainty Estimates of Predictions via a General Bias-Variance Decomposition (AISTATS'23)☆11Apr 21, 2023Updated 3 years ago
- ☆47Jan 28, 2026Updated 5 months ago
- A collection of resources and knowledge for analysis of scATAC+scRNA multi omics data☆10Sep 16, 2022Updated 3 years ago
- Contrastive Poisson latent variable models (CPLVMs)☆11Feb 7, 2022Updated 4 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆27Oct 17, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Dataloader for common proteomics search engine outputs into AnnData format☆14Mar 25, 2026Updated 3 months ago
- data and model repository for single-cell data☆136Dec 21, 2023Updated 2 years ago
- Simple scVI implementation☆13May 25, 2026Updated last month
- ☆35Jun 11, 2026Updated 2 weeks ago
- Powerful and lightweight package to identify tissue compartments in spatial transcriptomics datasets.☆19Jun 9, 2025Updated last year
- Python package for the semi-supervised analysis of multi-omics data☆14Oct 15, 2025Updated 8 months ago
- ☆38Dec 13, 2023Updated 2 years ago
- Resilient Multi-Agent Reinforcement Learning☆10Nov 4, 2022Updated 3 years ago
- Probabilistic contrastive principal component analysis (PCPCA)☆24Nov 7, 2021Updated 4 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Codes used for all the data analysis steps in the paper "Single-cell transcriptomics identifies an effectorness gradient shaping the resp…☆16Apr 15, 2020Updated 6 years ago
- Visualising data frames as funky heatmaps 📊, the Python implementation☆26Feb 6, 2025Updated last year
- An R package designed to demultiplex cell hashing data☆32Jun 10, 2026Updated 3 weeks ago
- Integrated pipeline for multiplexed image analysis☆107Jan 7, 2026Updated 5 months ago
- Conversion between scRNA-seq objects☆210May 5, 2026Updated last month
- ☆18Jul 31, 2021Updated 4 years ago
- Latent spaces for single cells☆20Oct 31, 2023Updated 2 years ago
- Cellular Genetics Informatics Notebooks☆24Nov 7, 2025Updated 7 months ago
- ☆14Jul 12, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scalable Multi-Agent Reinforcement Learning☆15Dec 25, 2021Updated 4 years ago
- my PhD thesis on Bayesian inference☆27Sep 2, 2013Updated 12 years ago
- Collection of scripts for analysis of pan fetal immune atlas☆32Aug 11, 2022Updated 3 years ago
- Automate unsupervised machine learning cell type identification using both protein expressions and cell spatial neighborhood information …☆41May 7, 2024Updated 2 years ago
- Multi-omics factor analysis v2☆66May 21, 2026Updated last month
- scDataset: Scalable Data Loading for Deep Learning on Large-Scale Single-Cell Omics☆45Jan 30, 2026Updated 5 months ago
- Single-cell archetypal analysis neural network☆16May 27, 2022Updated 4 years ago
- Reference mapping for single-cell genomics☆406Updated this week
- download and prepare a pdb file for docking wth Vina-flavoured algorithms☆13Oct 11, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)☆36Jan 8, 2025Updated last year
- ☆20Feb 27, 2013Updated 13 years ago
- Repo for the Tutorials of Day1-Day3 of the Nordic Probabilistic AI School 2021 (https://probabilistic.ai/)☆48Nov 9, 2021Updated 4 years ago
- AUCell: score single cells with gene regulatory networks☆196Mar 9, 2024Updated 2 years ago
- Filtering of Poison noise on a single-cell RNA-seq UMI count matrix☆81Updated this week
- Workshops on Computational Biology organized by our lab☆10Mar 25, 2024Updated 2 years ago
- A framework around Tensorflow-Keras that makes it easy to train and evaluate any deep learning architecture on imaging flow cytometry dat…☆12Dec 8, 2022Updated 3 years ago