biocorecrg / MOP2Links
Master of Pores 2
☆23Updated 10 months ago
Alternatives and similar repositories for MOP2
Users that are interested in MOP2 are comparing it to the libraries listed below
Sorting:
- for visual evaluation of read support for structural variation☆55Updated last year
- Automated Detection and Qualification of Differential Methylation☆14Updated last year
- ☆34Updated 2 years ago
- POSTRE: Prediction Of STRuctural variant Effects☆28Updated 8 months ago
- Immuological gene typing and annotation for genome assembly☆38Updated 7 months ago
- A tutorial on structural variant calling for short read sequencing data☆38Updated last year
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 3 years ago
- Structural variant caller☆55Updated 3 years ago
- A python tool box for fast and accurate quality control, conversion and alignment of nanopore sequencing data☆20Updated 3 years ago
- Pipeline for de novo clustering of long transcriptomic reads☆26Updated 3 years ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆54Updated last year
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆33Updated 2 years ago
- Structural Variant Prediction Viewer☆35Updated 8 years ago
- Structural variant (SV) analysis tools☆38Updated last year
- mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data☆38Updated last month
- modPhred is a pipeline for detection of DNA/RNA modifications from raw ONT data☆16Updated last year
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- perSVade: personalized Structural Variation detection☆40Updated last month
- A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes☆51Updated 9 months ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 2 years ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆34Updated last year
- catalog for long-read sequencing tools☆32Updated 2 years ago
- ☆51Updated 6 years ago
- Signal based nanopore RNA demultiplexing with convolutional neural networks☆38Updated last year
- Materials for Spring 2021 Applied Genomics Course☆53Updated 4 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆38Updated 2 years ago
- detection of duplications and deletions using Python based machine learning techniques☆28Updated 6 years ago
- ☆49Updated 11 months ago
- deSALT - De Bruijn graph-based Spliced Aligner for Long Transcriptome reads☆44Updated 3 years ago
- Fully automated generation of UCSC assembly hubs☆34Updated last year