daisybio / TF-PrioritizerLinks
Bioinformatics pipeline to identify differentially active transcription factors between conditions using expression and epigenetic data
☆14Updated last year
Alternatives and similar repositories for TF-Prioritizer
Users that are interested in TF-Prioritizer are comparing it to the libraries listed below
Sorting:
- The Zavolab Automated RNA-seq Pipeline☆35Updated 3 months ago
- nRex: Germline and somatic single-nucleotide, short indel and structural variant calling☆12Updated last month
- Analysis pipleine to model tumour clonal evolution from WGS data (driver annotation, quality control of copy number calls, subclonal and …☆18Updated 3 weeks ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆50Updated 3 weeks ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year
- Junction centric alternative splicing translator☆20Updated 2 years ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆17Updated 3 years ago
- Frequently used commands in Bioinformatics☆21Updated 2 weeks ago
- Nascent Transcription Processing Pipeline☆20Updated 2 weeks ago
- ☆29Updated 3 months ago
- Isoform-level functional RNA-Seq analysis 🧬☆33Updated 2 weeks ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆59Updated 4 months ago
- A VSCode extension pack for nf-core developers.☆15Updated 7 months ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- simplified cellranger for long-read data☆19Updated last month
- A nextflow pipeline which integrates multiple omic data streams and performs coordinated analysis☆11Updated last year
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆44Updated 4 months ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆17Updated 11 months ago
- ☆20Updated 4 months ago
- interactive plots for differential expression analysis☆34Updated 4 months ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆53Updated this week
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆75Updated last week
- Feature-rich Python implementation of the tximport package for gene count estimation.☆37Updated 3 weeks ago
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆16Updated 4 months ago
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆36Updated this week
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆31Updated last year
- ☆33Updated last month
- Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation☆21Updated 3 weeks ago
- Fast FASTQ sample demultiplexing in Rust.☆65Updated 4 months ago