daisybio / TF-PrioritizerLinks
Bioinformatics pipeline to identify differentially active transcription factors between conditions using expression and epigenetic data
☆14Updated last year
Alternatives and similar repositories for TF-Prioritizer
Users that are interested in TF-Prioritizer are comparing it to the libraries listed below
Sorting:
- The Zavolab Automated RNA-seq Pipeline☆36Updated last week
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆37Updated last year
- Analysis pipleine to model tumour clonal evolution from WGS data (driver annotation, quality control of copy number calls, subclonal and …☆20Updated 2 weeks ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆57Updated last week
- Junction centric alternative splicing translator☆21Updated 3 years ago
- nRex: Germline and somatic single-nucleotide, short indel and structural variant calling☆12Updated 4 months ago
- Isoform-level functional RNA-Seq analysis 🧬☆36Updated 2 months ago
- interactive plots for differential expression analysis☆34Updated 7 months ago
- Python program designed to reconstruct immunoglobulin gene rearrangements and oncogenic translocations from WGS, WES and capture NGS in l…☆21Updated 2 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- A nextflow pipeline which integrates multiple omic data streams and performs coordinated analysis☆11Updated last year
- A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.☆36Updated 3 years ago
- Frequently used commands in Bioinformatics☆23Updated last week
- ☆30Updated 7 months ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆41Updated 3 years ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆63Updated 8 months ago
- Workflow for Sequenza, cellularity and ploidy☆26Updated 5 months ago
- Comprehensive Human Expressed SequenceS☆19Updated 6 months ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆17Updated 3 years ago
- A set of tools to annotate VCF files with expression and readcount data☆30Updated last week
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆28Updated 7 months ago
- Nascent Transcription Processing Pipeline☆22Updated 2 months ago
- Interactive multiscale visualization for structural variation in human genomes☆71Updated last week
- software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data☆17Updated 6 years ago
- simplified cellranger for long-read data☆19Updated 5 months ago
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Updated 3 years ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 6 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week