TF Binding and Expression Target Analysis 2
☆22Nov 19, 2025Updated 8 months ago
Alternatives and similar repositories for BETA2
Users that are interested in BETA2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Identifying cell subpopulational differences among single-cell biospecimens☆17Sep 27, 2024Updated last year
- ☆20Jun 12, 2026Updated last month
- Snakemake with pytest example☆11Jul 18, 2020Updated 6 years ago
- cross-species analysis of cell identities, markers and regulations☆13Jul 11, 2025Updated last year
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆17Nov 20, 2018Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ChIP-seq peak caller for reads mapped to a graph-based reference genome☆26Aug 17, 2024Updated last year
- Suite of command-line software for high-performance graphical analysis of ChIP-seq/RNA-seq/ATAC-seq data☆21May 2, 2022Updated 4 years ago
- Pipeline for Cut&Tag analysis☆25Apr 15, 2025Updated last year
- R interface to megadepth: BigWig and BAM related utilities☆14Mar 31, 2026Updated 4 months ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆72Nov 14, 2025Updated 8 months ago
- Simulation tool for ChIP- and other -seq experiments☆14Mar 13, 2023Updated 3 years ago
- ☆25Dec 5, 2025Updated 8 months ago
- MGcount github repository☆14Jan 19, 2023Updated 3 years ago
- Efficiently compute robust markers across single-cell datasets☆13Apr 21, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Tool for IDentification and Enumeration of Spliced and Unspliced Read Fragments☆19Jun 23, 2026Updated last month
- ☆17May 30, 2022Updated 4 years ago
- Integrative analysis for scRNA-seq and scTCR-/scBCR-seq data☆22Updated this week
- CREAM (Clustering of Functional Regions Analysis Method) is a new method for identification of clusters of functional regions (COREs) wi…☆14Feb 11, 2021Updated 5 years ago
- R package for gene selection using k-NN graphs.☆14Jun 12, 2023Updated 3 years ago
- Genomic coordinates of problematic genomic regions as GRanges☆53Updated this week
- Enhanced Chromatin Occupancy (EChO)☆13Jan 8, 2020Updated 6 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆18Dec 19, 2023Updated 2 years ago
- Code to reproduce analysis of Milo manuscript☆16Aug 3, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A simple, intuitive and Efficient single cell binary Data Storage format☆16Oct 10, 2019Updated 6 years ago
- ☆22Jul 17, 2024Updated 2 years ago
- Heterogeneity Induced Pre-Processing tOol☆19Aug 15, 2021Updated 4 years ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Sep 5, 2024Updated last year
- scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing and spatial dat…☆321Jul 30, 2026Updated last week
- Scalable framework for integrating single-cell omics with genetic data using AnnData.☆20Jul 29, 2026Updated last week
- Multivariate stochastic modeling for transcriptional dynamics with cell-specific latent time using SDEvelo☆21Jan 28, 2025Updated last year
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆83Jul 17, 2026Updated 3 weeks ago
- A flexible python program for generating figures from regions of the genome.☆13Apr 6, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Context specific and dynamic gene regulatory network reconstruction and analysis☆129Aug 3, 2026Updated last week
- RUVprps enables accurate and scalable RNA-seq normalization without prior knowledge of biological and unwanted variation☆14Jun 11, 2026Updated last month
- ☆55May 19, 2026Updated 2 months ago
- Species-aware DNA language models capture regulatory elements and their evolution☆29Aug 21, 2023Updated 2 years ago
- ☆48Apr 18, 2020Updated 6 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆37Jul 5, 2021Updated 5 years ago
- Differential ATAC-seq toolkit☆29Dec 21, 2023Updated 2 years ago