Alternatives and similar repositories for ResPAN

Users that are interested in ResPAN are comparing it to the libraries listed below

• shmohammadi86 / SCINET
  ☆19Updated 4 years ago
• jingshuw / SAVERX
  R package for transfer learning of single-cell RNA-seq denoising
  ☆30Updated 3 years ago
• CostaLab / MOJITOO
  MOJITOO: a fast and universal method for integration of multimodal single cell data
  ☆11Updated last year
• aristoteleo / Scribe-py
  Regulatory networks with Direct Information in python
  ☆40Updated 2 years ago
• theislab / mubind
  Learning motif contributions to cell transitions using sequence features and graphs.
  ☆28Updated last year
• OSU-BMBL / ssread
  A single-cell and spatial RNA-seq database for Alzheimer’s Disease
  ☆26Updated last year
• Winnie09 / imputationBenchmark
  benchmark for single-cell RNA-seq imputation methods
  ☆29Updated last year
• const-ae / transformGamPoi-Paper
  ☆28Updated 2 years ago
• suinleelab / contrastiveVI
  ☆57Updated last year
• xinhe-lab / GSFA
  R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening …
  ☆22Updated 2 years ago
• jzhoulab / quasildr
  Quasilinear data representations for single-cell omics data analysis
  ☆43Updated 2 years ago
• lkmklsmn / insct
  scRNAseq integration with triplet neural networks
  ☆41Updated 2 years ago
• SydneyBioX / CiteFuse
  CiteFuse:
  ☆28Updated 2 years ago
• jishnu-lab / SLIDE
  ☆29Updated 5 months ago
• hemberg-lab / sc3s
  Single Cell Consensus Clustering with Speed
  ☆20Updated 2 years ago
• Center-for-Health-Data-Science / multiDGD
  ☆26Updated 6 months ago
• azizilab / decipher
  A single-cell analysis toolkit to jointly analyze samples from distinct conditions
  ☆34Updated 7 months ago
• netZoo / netbooks
  Netbooks is a JupyterHub catalog of use cases in gene regulatory network inference using netZoo methods..
  ☆44Updated last month
• JialongJiang / DSPIN
  Code and example of the D-SPIN framework
  ☆24Updated 2 weeks ago
• brianhie / trajectorama
  Multi-study integration of cellular trajectories
  ☆19Updated 5 years ago
• BorchLab / Ibex
  Using BCR and expression for sequence embedding
  ☆25Updated 2 weeks ago
• shmohammadi86 / ACTIONet
  ACTIONet single-cell analysis framework
  ☆43Updated last year
• zhouzilu / cTPnet
  cTPnet Package
  ☆27Updated 3 years ago
• Vivianstats / scINSIGHT
  Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data
  ☆22Updated last year
• KlugerLab / ALRA
  Imputation method for scRNA-seq based on low-rank approximation
  ☆77Updated last year
• doraadong / UNIFAN
  Unsupervised cell functional annotation for single-cell RNA-Seq
  ☆22Updated 2 years ago
• Katsevich-Lab / sceptre
  An R package for single-cell CRISPR screen data analysis emphasizing statistical rigor, massive scalability, and ease of use.
  ☆34Updated 2 months ago
• raphael-group / netNMF-sc
  netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data
  ☆23Updated 4 years ago
• PYangLab / Matilda
  Matilda is a multi-task framework for learning from single-cell multimodal omics data. Matilda leverages the information from the multi-m…
  ☆22Updated 5 months ago
• thomasmaxwellnorman / Perturbseq_GI
  Code for reproducing "Exploring genetic interaction manifolds constructed from rich single-cell phenotypes"
  ☆65Updated 5 years ago