PULSAR: a Foundation Model for Multi-scale and Multicellular Biology
☆28Updated this week
Alternatives and similar repositories for PULSAR
Users that are interested in PULSAR are comparing it to the libraries listed below
Sorting:
- ☆19Apr 30, 2025Updated 10 months ago
- Automated ingestion and conversion of various single-cell data formats, within and across species☆13Jan 26, 2026Updated last month
- Visualizing Somatic Alterations of 10X Spatial Transcriptomics Data☆14Nov 7, 2024Updated last year
- Python code for cross-condition label refinement in single-cell data with HiDDEN☆14Sep 21, 2024Updated last year
- Genotype-Neighborhood Associations: A tool for identifying genetic variant associations to the abundance of cell states in single-cell d…☆16Oct 5, 2024Updated last year
- R package for analysing meaningful differences in the numbers of cell populations from single-cell phenotypic data☆22Oct 8, 2025Updated 4 months ago
- ☆30Jan 22, 2025Updated last year
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Mar 25, 2024Updated last year
- federated learning with tabular learning☆26Mar 4, 2025Updated 11 months ago
- Multi-resolution Variational Inference☆22Updated this week
- CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets☆189Dec 13, 2025Updated 2 months ago
- ☆97Aug 26, 2025Updated 6 months ago
- ☆63Sep 13, 2024Updated last year
- Chromatin interaction aware gene regulatory modeling with graph attention networks☆28Feb 21, 2023Updated 3 years ago
- Gene regulatory network inference for RNA velocity and pseudotime data☆28Nov 6, 2025Updated 3 months ago
- ☆36Feb 20, 2026Updated last week
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆10Updated this week
- Weakly supervised learning uncovers phenotypic signatures in single-cell data☆38Dec 17, 2025Updated 2 months ago
- BioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflow☆42Aug 21, 2024Updated last year
- A modular framework for multimodal cross-cell-type transcriptional regulation models☆102Feb 6, 2026Updated 3 weeks ago
- A web-based, time-series visualizer for tracked segmented data.☆13Feb 21, 2026Updated last week
- ☆11Updated this week
- Automatically interact with SVG charts.☆19Sep 23, 2025Updated 5 months ago
- ☆15Nov 3, 2025Updated 3 months ago
- Simulation and optimization of cell clusters.☆12Aug 25, 2025Updated 6 months ago
- ☆12Apr 3, 2025Updated 10 months ago
- Code to reproduce the analysis of "Decoding gene regulation in the mouse embryo using single-cell multi-omics""☆40Feb 19, 2026Updated last week
- Optimal gating strategies for flow and mass cytometry.☆16Nov 5, 2025Updated 3 months ago
- Spatial Optimization for R☆38Jan 27, 2026Updated last month
- A Structured Grammar for Chart Annotation☆15May 8, 2025Updated 9 months ago
- ☆12May 29, 2024Updated last year
- ☆16Jun 8, 2023Updated 2 years ago
- MCP server for single cell analysis☆12May 15, 2025Updated 9 months ago
- Public repo containing code to train, visualize, and evaluate semi-supervised topic models and baselines for regression/classification on…☆12Apr 15, 2020Updated 5 years ago
- WebGL Renderer extension for Vega☆13Dec 10, 2021Updated 4 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆10Mar 10, 2022Updated 3 years ago
- AllenDigger, a tool for spatial expression data visualization, spatial heterogeneity delineation and single cell registration based on Al…☆14Apr 2, 2023Updated 2 years ago
- A model context protocol (MCP) server for the EBI Ontology Lookup Service (OLS)☆23Jul 16, 2025Updated 7 months ago
- Modern physics lab reports (2023&2024 Fall) / 2023&2024 秋 近代物理实验报告☆15Dec 27, 2024Updated last year