JhaKanchan15 / PPI_GNN

Related projects ⓘ

Alternatives and complementary repositories for PPI_GNN

• biomed-AI / GraphPPIS
  ☆49Updated 3 months ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆56Updated 3 months ago
• ZhonghuiGu / HEAL
  ☆42Updated 2 months ago
• baranwa2 / Struct2Graph
  A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction
  ☆58Updated 3 years ago
• DeepRank / Deeprank-GNN
  Graph Network for protein-protein interface
  ☆117Updated 7 months ago
• 595693085 / DGraphDTA
  a novel DTA predition method using graph neural network
  ☆70Updated last year
• samsledje / ConPLex_dev
  ☆43Updated 8 months ago
• Liuxg16 / GeoPPI
  ☆75Updated 2 years ago
• DeepGraphLearning / ESM-GearNet
  ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)
  ☆79Updated last year
• lvguofeng / GNN_PPI
  Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".
  ☆72Updated 2 years ago
• KailiWang1 / DeepDTAF
  a deep learning architecture for protein-ligand binding affinity prediction
  ☆64Updated 9 months ago
• jertubiana / ScanNet
  ☆117Updated last year
• anton-bushuiev / PPIRef
  Dataset and package for working with protein-protein interactions in 3D
  ☆83Updated 2 weeks ago
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆66Updated 3 years ago
• CSUBioGroup / BACPI
  A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.
  ☆29Updated last year
• biomed-AI / SPROF-GO
  Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion
  ☆37Updated 3 months ago
• varun-shanker / structural-evolution
  ☆80Updated 3 months ago
• dmis-lab / PerceiverCPI
  Bioinformatics'2022 PerceiverCPI: A nested cross-attention network for compound-protein interaction prediction
  ☆35Updated last year
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆135Updated last year
• dahjan / DMS_opt
  ☆67Updated 4 years ago
• aqlaboratory / rgn2
  ☆101Updated 11 months ago
• vsomnath / holoprot
  Multi-Scale Representation Learning on Proteins (NeurIPS 2021)
  ☆47Updated last year
• fangyangbit / S-VGAE
  ☆18Updated 5 years ago
• MahaThafar / Drug-Target-Interaction-Prediciton-Method
  This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…
  ☆27Updated 3 years ago
• huankoh / PSICHIC
  PSICHIC (pronounced Psychic) - PhySIcoCHemICal graph neural network for learning protein-ligand interaction fingerprints from sequence da…
  ☆81Updated 4 months ago
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆80Updated this week
• peizhenbai / DrugBAN
  Interpretable bilinear attention network with domain adaptation improves drug-target prediction.
  ☆105Updated last year
• GIST-CSBL / HoTS
  HoTS: Sequence-based prediction of binding regions and drug-target interactions.
  ☆25Updated 2 years ago
• Layne-Huang / CoaDTI
  Multi-modal co-attention for drug-target interaction annotation and Its Application to SARS-CoV-2
  ☆16Updated last year
• Graylab / GeoDock
  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.
  ☆84Updated 3 months ago