JhaKanchan15 / PPI_GNNLinks
☆66Updated 2 years ago
Alternatives and similar repositories for PPI_GNN
Users that are interested in PPI_GNN are comparing it to the libraries listed below
Sorting:
- A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction☆61Updated 4 years ago
- Graph Network for protein-protein interface☆120Updated last year
- Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".☆80Updated 3 years ago
- This is the repository for PIPR. This repository contains the source code and links to some datasets used in the ISMB/ECCB-2019 paper "Mu…☆103Updated 2 years ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆60Updated last year
- Interpretable bilinear attention network with domain adaptation improves drug-target prediction.☆126Updated 2 years ago
- ☆52Updated last year
- ☆51Updated last year
- ☆43Updated last year
- DeepConv-DTI: Prediction of drug-target interactions via deep learning with convolution on protein sequences☆76Updated 3 years ago
- ☆88Updated 2 years ago
- ☆110Updated 3 years ago
- MolTrans: Molecular Interaction Transformer for Drug Target Interaction Prediction (Bioinformatics)☆211Updated 3 years ago
- ☆19Updated 6 years ago
- ☆112Updated last year
- ☆130Updated last month
- Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure☆148Updated 4 years ago
- a deep learning architecture for protein-ligand binding affinity prediction☆76Updated last year
- ☆20Updated 2 years ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆109Updated last year
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆100Updated 2 weeks ago
- MONN: a Multi-Objective Neural Network for Predicting Pairwise Non-Covalent Interactions and Binding Affinities between Compounds and Pro…☆104Updated 4 years ago
- ☆54Updated 11 months ago
- Protein structure datasets for machine learning.☆111Updated 3 months ago
- Protein-compound affinity prediction through unified RNN-CNN☆147Updated last year
- a novel DTA predition method using graph neural network☆74Updated 2 years ago
- Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion☆41Updated last year
- Dataset and package for working with protein-protein interactions in 3D☆95Updated 3 months ago
- predicting peptide-protein interactions☆132Updated last year
- ☆77Updated 2 months ago