☆19Aug 6, 2019Updated 6 years ago
Alternatives and similar repositories for S-VGAE
Users that are interested in S-VGAE are comparing it to the libraries listed below
Sorting:
- ☆69Nov 1, 2022Updated 3 years ago
- ☆13May 30, 2019Updated 6 years ago
- A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction☆61Aug 7, 2021Updated 4 years ago
- ☆10Jun 5, 2021Updated 4 years ago
- ☆10Feb 14, 2022Updated 4 years ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆109Feb 19, 2026Updated last week
- Clustering tool for biomolecular structural ensembles and data in general.☆10Aug 24, 2020Updated 5 years ago
- Kdrew's scripts for handling protein complex map data☆14Jun 12, 2025Updated 8 months ago
- PAgeRAnk-flux on Graphlet-guided network for multi-Omic data integratioN - Network Inference☆11Nov 12, 2024Updated last year
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆27Jan 8, 2024Updated 2 years ago
- ☆13Feb 23, 2024Updated 2 years ago
- TUnA: Transformer-based Uncertainty Aware model for PPI Prediction☆14Dec 21, 2025Updated 2 months ago
- Improving protein-protein interactions prediction accuracy using XGBoost feature selection and stacked ensemble classifier☆12Jun 18, 2020Updated 5 years ago
- https://grasp.ufv.br/☆15Jul 6, 2023Updated 2 years ago
- Protein Structure Archiver☆14Sep 10, 2025Updated 5 months ago
- ☆15Oct 9, 2025Updated 4 months ago
- SGPPI: structure-aware prediction of protein-protein interactions in rigorous conditions with graph convolutional network☆14Nov 17, 2022Updated 3 years ago
- Network-based module discovery algorithm with high rate of empirically-validated term calls☆14Oct 22, 2023Updated 2 years ago
- Orientation of the protein-protein interaction network using network diffusion techniques☆15Mar 16, 2021Updated 4 years ago
- generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.☆16Oct 19, 2019Updated 6 years ago
- [Bioinformatics 2022] Cross-Modality and Self-Supervised Protein Embedding for Compound-Protein Affinity and Contact Prediction☆16Jun 6, 2024Updated last year
- SPRINT: Scoring PRotein INTeractions☆16Aug 11, 2020Updated 5 years ago
- ☆17Feb 21, 2022Updated 4 years ago
- Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".☆82Feb 8, 2022Updated 4 years ago
- Generate A3M and TGT file from a given sequence in FASTA format.☆11Nov 16, 2020Updated 5 years ago
- Gene Co-expression Network analysis pipeline☆25Jul 3, 2023Updated 2 years ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆27Aug 12, 2021Updated 4 years ago
- Create DSSP and HSSP files☆95Jul 18, 2024Updated last year
- ☆24Mar 29, 2021Updated 4 years ago
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆22Oct 9, 2020Updated 5 years ago
- A deep learning model to predict anticancer peptides.☆24Jul 10, 2019Updated 6 years ago
- Disease pathways in the human interactome☆23Mar 20, 2018Updated 7 years ago
- ☆27Feb 16, 2022Updated 4 years ago
- ☆22May 31, 2023Updated 2 years ago
- Learn single-cell dynamics using neural differential equations☆62Jan 6, 2026Updated last month
- An Interpretable Self-Attention Network with block-attention and attention-attribution.☆12Sep 22, 2023Updated 2 years ago
- SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)☆65May 9, 2020Updated 5 years ago
- A protein 3D structure prediction application☆67May 5, 2021Updated 4 years ago
- An open-source library for the analysis of protein interactions.☆33Dec 5, 2021Updated 4 years ago