Alternatives and similar repositories for Struct2Graph

Users that are interested in Struct2Graph are comparing it to the libraries listed below

• biomed-AI / GraphPPIS
  ☆52Updated 10 months ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆59Updated 10 months ago
• jertubiana / ScanNet
  ☆126Updated last year
• kiharalab / GNN_DOVE
  Code for "Protein Docking Model Evaluation by Graph Neural Networks"
  ☆59Updated 2 years ago
• Liuxg16 / GeoPPI
  ☆86Updated 2 years ago
• JhaKanchan15 / PPI_GNN
  ☆65Updated 2 years ago
• DeepRank / Deeprank-GNN
  Graph Network for protein-protein interface
  ☆120Updated last year
• KailiWang1 / DeepDTAF
  a deep learning architecture for protein-ligand binding affinity prediction
  ☆74Updated last year
• xzenglab / TAGPPI
  ☆20Updated 2 years ago
• CSUBioGroup / DeepPPISP
  Protein-protein interaction sites prediction through combining local and global features with deep neural networks
  ☆54Updated 5 years ago
• lvguofeng / GNN_PPI
  Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".
  ☆80Updated 3 years ago
• samsledje / ConPLex_dev
  ☆48Updated last year
• wengong-jin / RefineGNN
  ☆130Updated 2 years ago
• ml4bio / RiboDiffusion
  ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models
  ☆47Updated 6 months ago
• ProteinDesignLab / protein_seq_des
  Code for our paper "Protein sequence design with a learned potential"
  ☆79Updated last year
• leeyang / DRfold
  ☆39Updated last year
• BioinfoMachineLearning / DeepInteract
  A geometric deep learning framework (Geometric Transformers) for predicting protein interface contacts. (ICLR 2022)
  ☆64Updated 2 years ago
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆154Updated last year
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆71Updated 4 years ago
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆123Updated last week
• varun-shanker / structural-evolution
  ☆108Updated 10 months ago
• AndMastro / protein-ligand-GNN
  This repository contains the code for the work on protein-ligand interaction with GNNs and XAI
  ☆35Updated last year
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆112Updated last year
• 595693085 / DGraphDTA
  a novel DTA predition method using graph neural network
  ☆74Updated last year
• hiranumn / DeepAccNet
  Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.
  ☆86Updated 3 years ago
• MartinThoma / propy3
  A Python 3 version of the protein descriptor package propy
  ☆42Updated 2 years ago
• wengong-jin / abdockgen
  ☆106Updated 2 years ago
• zqgao22 / HIGH-PPI
  ☆86Updated 2 years ago
• TencentAILabHealthcare / PALM
  ☆44Updated last year
• BioinfoMachineLearning / DIPS-Plus
  The Enhanced Database of Interacting Protein Structures for Interface Prediction
  ☆49Updated last year