Alternatives and similar repositories for Struct2Graph:

Users that are interested in Struct2Graph are comparing it to the libraries listed below

• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆60Updated 6 months ago
• biomed-AI / GraphPPIS
  ☆50Updated 6 months ago
• JhaKanchan15 / PPI_GNN
  ☆60Updated 2 years ago
• jertubiana / ScanNet
  ☆119Updated last year
• lvguofeng / GNN_PPI
  Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".
  ☆76Updated 3 years ago
• zqgao22 / HIGH-PPI
  ☆83Updated last year
• kiharalab / GNN_DOVE
  Code for "Protein Docking Model Evaluation by Graph Neural Networks"
  ☆59Updated last year
• wengong-jin / RefineGNN
  ☆126Updated 2 years ago
• Liuxg16 / GeoPPI
  ☆79Updated 2 years ago
• BioinfoMachineLearning / DeepInteract
  A geometric deep learning pipeline for predicting protein interface contacts. (ICLR 2022)
  ☆63Updated 2 years ago
• BioinfoMachineLearning / DIPS-Plus
  The Enhanced Database of Interacting Protein Structures for Interface Prediction
  ☆48Updated last year
• muhaochen / seq_ppi
  This is the repository for PIPR. This repository contains the source code and links to some datasets used in the ISMB/ECCB-2019 paper "Mu…
  ☆94Updated 2 years ago
• DeepRank / Deeprank-GNN
  Graph Network for protein-protein interface
  ☆119Updated 10 months ago
• 595693085 / DGraphDTA
  a novel DTA predition method using graph neural network
  ☆74Updated last year
• ml4bio / RiboDiffusion
  ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models
  ☆37Updated 3 months ago
• KailiWang1 / DeepDTAF
  a deep learning architecture for protein-ligand binding affinity prediction
  ☆71Updated last year
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆69Updated 4 years ago
• fouticus / pipgcn
  Protein Interface Prediction using Graph Convolutional Networks
  ☆92Updated 4 years ago
• CSUBioGroup / DeepPPISP
  Protein-protein interaction sites prediction through combining local and global features with deep neural networks
  ☆52Updated 5 years ago
• ProteinDesignLab / protein_seq_des
  Code for our paper "Protein sequence design with a learned potential"
  ☆80Updated last year
• jhmlam / NucleicNet
  ☆35Updated 2 years ago
• samsledje / ConPLex_dev
  ☆48Updated last year
• HeliXonProtein / binding-ddg-predictor
  open source repository
  ☆135Updated last year
• hiranumn / DeepAccNet
  Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.
  ☆84Updated 3 years ago
• melobio / EvoPlay
  ☆69Updated last year
• zpliulab / GeoBind
  Segmentation of nucleic acid binding interface on protein surface with geometric deep learning
  ☆13Updated last year
• CSUBioGroup / BACPI
  A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.
  ☆30Updated 2 years ago
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆143Updated last year
• Shen-Lab / DeepAffinity
  Protein-compound affinity prediction through unified RNN-CNN
  ☆139Updated 7 months ago
• drorlab / DIPS
  Database of Interacting Protein Structures (DIPS)
  ☆96Updated last year