A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction
☆61Aug 7, 2021Updated 4 years ago
Alternatives and similar repositories for Struct2Graph
Users that are interested in Struct2Graph are comparing it to the libraries listed below
Sorting:
- ☆69Nov 1, 2022Updated 3 years ago
- ☆19Aug 6, 2019Updated 6 years ago
- Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".☆82Feb 8, 2022Updated 4 years ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆111Feb 19, 2026Updated last month
- This is the repository for PIPR. This repository contains the source code and links to some datasets used in the ISMB/ECCB-2019 paper "Mu…☆112Jan 14, 2023Updated 3 years ago
- ☆22May 31, 2023Updated 2 years ago
- ☆13May 30, 2019Updated 6 years ago
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆28Jan 8, 2024Updated 2 years ago
- An open-source library for the analysis of protein interactions.☆33Dec 5, 2021Updated 4 years ago
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆63Jun 17, 2024Updated last year
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Jul 25, 2023Updated 2 years ago
- ☆91Sep 7, 2022Updated 3 years ago
- Text mining tool to retrieve protein-protein interactions from the scientific literature.☆13Jun 9, 2019Updated 6 years ago
- Computationally Restoring the Potency of a Clinical Antibody☆19Mar 1, 2024Updated 2 years ago
- 3D-CNN based water position prediction method☆11Nov 20, 2023Updated 2 years ago
- ☆92Mar 27, 2023Updated 2 years ago
- Improving protein-protein interactions prediction accuracy using XGBoost feature selection and stacked ensemble classifier☆12Jun 18, 2020Updated 5 years ago
- Deep functional residue identification☆348Mar 24, 2023Updated 2 years ago
- Segmentation of nucleic acid binding interface on protein surface with geometric deep learning☆14May 3, 2023Updated 2 years ago
- Deep learning prediction of protein residue-residue distances☆23Jun 28, 2022Updated 3 years ago
- ☆55Aug 3, 2024Updated last year
- a deep learning based drug target interaction prediction model☆11Nov 5, 2022Updated 3 years ago
- Protein-Protein Docking using Genetic Algorithm☆20Mar 9, 2026Updated last week
- alphafold FAPE loss☆10Sep 28, 2021Updated 4 years ago
- A Python 3 version of the protein descriptor package propy☆49Feb 8, 2023Updated 3 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Mar 22, 2024Updated last year
- ☆24Mar 29, 2021Updated 4 years ago
- 3D equivariant graph transformer for all-atom refinement of protein tertiary structures☆28Jun 21, 2023Updated 2 years ago
- DISTEVAL: A web-server for evaluating protein inter-residue distances☆18Mar 7, 2022Updated 4 years ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆119Oct 30, 2025Updated 4 months ago
- Generates consistent PSSM and/or PDB files for protein-protein complexes☆20Jun 26, 2022Updated 3 years ago
- DeepAAI☆35Dec 25, 2024Updated last year
- MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.☆736Jun 19, 2024Updated last year
- DAQ: Residue-Wise Local Quality Estimation for Protein Models from Cryo-EM Maps☆17Jan 30, 2026Updated last month
- ☆303Updated this week
- ☆20May 7, 2024Updated last year
- Fast and accurate protein domain segmentation using Invariant Point Attention☆45May 22, 2025Updated 9 months ago
- DDI-LLM:💊 Drug-Drug Interaction Prediction: Experimenting With Large Language-Based Drug Information Embedding For Multi-View Representa…☆14Sep 15, 2023Updated 2 years ago
- Material from papers from KULL centre☆71May 29, 2024Updated last year