DeepRank / DeepRank-GNN-esmLinks
Graph Network for protein-protein interface including language model features
☆32Updated last year
Alternatives and similar repositories for DeepRank-GNN-esm
Users that are interested in DeepRank-GNN-esm are comparing it to the libraries listed below
Sorting:
- ☆47Updated 9 months ago
- ☆53Updated 2 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- Machine learning-driven antibody design☆60Updated 2 years ago
- GTalign, high-performance protein structure alignment, superposition and search☆51Updated 2 months ago
- Machine learning prediction of enzyme optimum pH☆47Updated 5 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆59Updated 7 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆85Updated 2 months ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- Fragment binding prediction with ColabFold☆37Updated 7 months ago
- Kuhlman Lab Installation of AlphaFold3☆36Updated 3 weeks ago
- ☆30Updated last year
- scripts and facilities for in-silico mutagenesis with FoldX☆61Updated 3 months ago
- Learning the language of protein-protein interactions☆98Updated last month
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 6 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆70Updated this week
- Tools for annotation, processing and ML for antibody sequences☆33Updated last week
- Fast and accurate protein domain segmentation using Invariant Point Attention☆42Updated 5 months ago
- Python package to manage protein structures and their annotations☆44Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 3 months ago
- ☆50Updated 2 years ago
- AlphaFold-initiated replica exchange protein docking☆84Updated 4 months ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆27Updated 7 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆34Updated last year
- The DSSP building software☆47Updated 2 years ago
- Protein Structure Analysis☆63Updated 3 weeks ago
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆54Updated 6 months ago
- A program fror inter-protein contact prediction from structures of interacting proteins☆19Updated last year
- ☆71Updated 7 months ago
- Template-based protein design with Raygun☆74Updated this week