Alternatives and similar repositories for DeepRank-GNN-esm

Users that are interested in DeepRank-GNN-esm are comparing it to the libraries listed below

• minmarg / gtalign_alpha
  GTalign, high-performance protein structure alignment, superposition and search
  ☆52Updated 4 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆55Updated 5 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆50Updated 8 months ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆44Updated 7 months ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆61Updated 9 months ago
• SNU-CSSB / RF2-Lite
  ☆32Updated last year
• AbSciBio / igdesign
  ☆47Updated last year
• JudeWells / chainsaw
  ☆47Updated last year
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆65Updated last week
• wells-wood-research / de-stress
  DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
  ☆29Updated 10 months ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆114Updated 5 months ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆29Updated 6 months ago
• gwlilabmit / FragFold
  Fragment binding prediction with ColabFold
  ☆41Updated 2 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆77Updated 2 months ago
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)…
  ☆63Updated 2 months ago
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆63Updated 2 years ago
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆37Updated 3 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆72Updated last month
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆113Updated 3 months ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆70Updated last year
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆44Updated 3 years ago
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆37Updated this week
• AlexanderKroll / ESP
  ☆77Updated last year
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆45Updated last year
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆76Updated last month
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆36Updated 9 months ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆35Updated 2 years ago
• jtrinquier / SoftAlign
  ☆30Updated this week
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆46Updated 2 years ago