lvguofeng / GNN_PPILinks
Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".
☆80Updated 3 years ago
Alternatives and similar repositories for GNN_PPI
Users that are interested in GNN_PPI are comparing it to the libraries listed below
Sorting:
- Interpretable bilinear attention network with domain adaptation improves drug-target prediction.☆124Updated 2 years ago
- ☆87Updated 2 years ago
- This is the repository for PIPR. This repository contains the source code and links to some datasets used in the ISMB/ECCB-2019 paper "Mu…☆101Updated 2 years ago
- A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction☆61Updated 3 years ago
- TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label…☆144Updated 3 years ago
- Predicting Drug Protein Interaction using Quasi-Visual Question Answering System☆121Updated 11 months ago
- a novel DTA predition method using graph neural network☆74Updated 2 years ago
- ☆66Updated 2 years ago
- ☆89Updated last year
- codes for KPGT (Knowledge-guided Pre-training of Graph Transformer)☆114Updated 9 months ago
- Protein-protein interaction sites prediction through combining local and global features with deep neural networks☆54Updated 5 years ago
- ☆52Updated 10 months ago
- ☆45Updated last year
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆32Updated 2 years ago
- DeepConv-DTI: Prediction of drug-target interactions via deep learning with convolution on protein sequences☆76Updated 3 years ago
- GraphDTA: Predicting drug-target binding affinity with graph neural networks☆258Updated 4 years ago
- Official implementation of 'Structure-aware Interactive Graph Neural Networks for the Prediction of Protein-Ligand Binding Affinity' (KDD…☆37Updated 3 years ago
- ☆52Updated 11 months ago
- This is The repository for Paper "AttentionSiteDTI: Attention Based Model for Predicting Drug-Target Interaction Using Graph Representati…☆44Updated last year
- ☆13Updated 4 years ago
- Multi-modal co-attention for drug-target interaction annotation and Its Application to SARS-CoV-2☆17Updated 2 years ago
- MolTrans: Molecular Interaction Transformer for Drug Target Interaction Prediction (Bioinformatics)☆210Updated 3 years ago
- BridgeDPI: A Novel Graph Neural Network for Predicting Drug-Protein Interactions☆20Updated 6 months ago
- MONN: a Multi-Objective Neural Network for Predicting Pairwise Non-Covalent Interactions and Binding Affinities between Compounds and Pro…☆102Updated 4 years ago
- Graph Network for protein-protein interface☆120Updated last year
- ☆28Updated 4 years ago
- HyperAttentionDTI: improving drug–protein interaction prediction by sequence-based deep learning with attention mechanism. This repositor…☆43Updated 4 years ago
- This is a code for compound-protein interaction (CPI) prediction based on a graph neural network (GNN) for compounds and a convolutional …☆163Updated 4 years ago
- ☆41Updated last year
- ☆129Updated 2 years ago