lvguofeng / GNN_PPI
Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".
☆79Updated 3 years ago
Alternatives and similar repositories for GNN_PPI:
Users that are interested in GNN_PPI are comparing it to the libraries listed below
- Interpretable bilinear attention network with domain adaptation improves drug-target prediction.☆121Updated 2 years ago
- This is the repository for PIPR. This repository contains the source code and links to some datasets used in the ISMB/ECCB-2019 paper "Mu…☆99Updated 2 years ago
- A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction☆60Updated 3 years ago
- ☆84Updated 2 years ago
- ☆64Updated 2 years ago
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆30Updated 2 years ago
- codes for KPGT (Knowledge-guided Pre-training of Graph Transformer)☆106Updated 7 months ago
- ☆44Updated last year
- a novel DTA predition method using graph neural network☆74Updated last year
- ☆86Updated last year
- ☆50Updated 8 months ago
- ☆52Updated 9 months ago
- HyperAttentionDTI: improving drug–protein interaction prediction by sequence-based deep learning with attention mechanism. This repositor…☆41Updated 3 years ago
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 3 years ago
- Multi-modal co-attention for drug-target interaction annotation and Its Application to SARS-CoV-2☆17Updated 2 years ago
- ☆28Updated 3 years ago
- Protein-protein interaction sites prediction through combining local and global features with deep neural networks☆54Updated 5 years ago
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆35Updated 3 years ago
- a deep learning architecture for protein-ligand binding affinity prediction☆74Updated last year
- Predicting Drug Protein Interaction using Quasi-Visual Question Answering System☆118Updated 9 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆59Updated 9 months ago
- SSM-DTA: Breaking the Barriers of Data Scarcity in Drug-Target Affinity Prediction (Briefings in Bioinformatics 2023)☆52Updated 11 months ago
- K-BERT for molecular property prediction.☆29Updated 2 years ago
- PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarit…☆24Updated 3 years ago
- ☆130Updated 2 years ago
- Repo of pharmacophoric constrained heterogeneous-graph-transformer☆17Updated 2 years ago
- The code for SAG-DTA: Prediction of Drug–Target Affinity Using Self-Attention Graph Network.☆11Updated 3 years ago
- ☆14Updated 2 years ago
- DeepConv-DTI: Prediction of drug-target interactions via deep learning with convolution on protein sequences☆74Updated 3 years ago
- This is The repository for Paper "AttentionSiteDTI: Attention Based Model for Predicting Drug-Target Interaction Using Graph Representati…☆43Updated last year