Alternatives and similar repositories for FAPEloss:

Users that are interested in FAPEloss are comparing it to the libraries listed below

• dtischer / trdesign-motif
  Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…
  ☆16Updated 3 years ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆53Updated 5 months ago
• liuyf020419 / SCUBA-D
  ☆60Updated last year
• brennanaba / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆32Updated 2 years ago
• bigict / ProDESIGN-LE
  An accurate and efficient protein sequence design approach
  ☆24Updated last month
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆65Updated 8 months ago
• haddocking / fcc
  Fraction of Common Contacts Clustering Algorithm for Protein Structures
  ☆26Updated 3 years ago
• Rocklin-Lab / cdna-display-proteolysis-pipeline
  ☆23Updated 2 years ago
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆32Updated 3 weeks ago
• BioinfoMachineLearning / DeepRefine
  A geometric deep learning method for refining and assessing protein complex structures.
  ☆15Updated 2 years ago
• tommyhuangthu / FASPR
  an ultra-fast and accurate program for deterministic protein sidechain packing
  ☆30Updated 2 months ago
• sokrypton / roscon2024
  Tutorial files
  ☆11Updated 8 months ago
• fteufel / alphafold-peptide-receptors
  Identifying peptide-receptor interactions using AlphaFold-Multimer
  ☆26Updated last year
• Furman-Lab / PatchMAN
  ☆26Updated 8 months ago
• tommyhuangthu / EvoEF2
  a fast and accurate physical energy function extended from EvoEF for protein sequence design
  ☆29Updated last year
• ba-lab / disteval
  DISTEVAL: A web-server for evaluating protein inter-residue distances
  ☆18Updated 3 years ago
• barricklab / mutant-protein-stability
  Modeling the effects of mutations in proteins using PyRosetta
  ☆25Updated 7 years ago
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆47Updated 2 years ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆22Updated 9 months ago
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆30Updated 6 years ago
• LPDI-EPFL / RosettaSurf
  ☆13Updated 3 years ago
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 3 years ago
• bwicky / oligomer_hallucination
  ☆35Updated last year
• Graylab / deepH3-distances-orientations
  ☆34Updated 3 years ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆37Updated 5 months ago
• mit-ll / AlphaSeq_Antibody_Dataset
  Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide
  ☆21Updated 2 years ago
• Sanofi-Public / LMR-SurfaceID
  Repo contains source code of the SurfaceID paper
  ☆22Updated last year
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆27Updated last year
• AbSciBio / igdesign
  ☆37Updated 3 months ago
• RosettaCommons / demos
  Demos of many Rosetta applications
  ☆17Updated 6 months ago