Alternatives and similar repositories for Deeprank-GNN

Users that are interested in Deeprank-GNN are comparing it to the libraries listed below

• jertubiana / ScanNet
  ☆138Updated 7 months ago
• samsledje / ConPLex_dev
  ☆54Updated last year
• anton-bushuiev / PPIRef
  Dataset and package for working with protein-protein interactions in 3D
  ☆104Updated 9 months ago
• HeliXonProtein / binding-ddg-predictor
  open source repository
  ☆145Updated 2 years ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆61Updated last year
• baranwa2 / Struct2Graph
  A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction
  ☆61Updated 4 years ago
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆76Updated 5 years ago
• varun-shanker / structural-evolution
  ☆122Updated last year
• biomed-AI / GraphPPIS
  ☆55Updated last year
• leeyang / DRfold
  ☆41Updated 2 years ago
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆173Updated 4 months ago
• JhaKanchan15 / PPI_GNN
  ☆69Updated 3 years ago
• BioinfoMachineLearning / DIPS-Plus
  The Enhanced Database of Interacting Protein Structures for Interface Prediction
  ☆53Updated 5 months ago
• MartinThoma / propy3
  A Python 3 version of the protein descriptor package propy
  ☆48Updated 3 years ago
• 595693085 / DGraphDTA
  a novel DTA predition method using graph neural network
  ☆76Updated 2 years ago
• Graylab / GeoDock
  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.
  ☆98Updated last year
• KailiWang1 / DeepDTAF
  a deep learning architecture for protein-ligand binding affinity prediction
  ☆76Updated 2 years ago
• ProteinDesignLab / protein_seq_des
  Code for our paper "Protein sequence design with a learned potential"
  ☆82Updated 2 years ago
• wengong-jin / abdockgen
  ☆108Updated 2 years ago
• aws-samples / lm-gvp
  LM-GVP: A Generalizable Deep Learning Framework for Protein Property Prediction from Sequence and Structure
  ☆65Updated last year
• aqlaboratory / rgn2
  ☆109Updated 2 years ago
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆127Updated 2 months ago
• LBM-EPFL / PeSTo
  Geometric deep learning method to predict protein binding interfaces from a protein structure.
  ☆155Updated 2 years ago
• THUNLP-MT / dyMEAN
  This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"
  ☆125Updated 11 months ago
• kiharalab / GNN_DOVE
  Code for "Protein Docking Model Evaluation by Graph Neural Networks"
  ☆59Updated 2 years ago
• DeepGraphLearning / GearBind
  Pretrainable geometric graph neural network for antibody affinity maturation
  ☆71Updated 10 months ago
• J-SNACKKB / FLIP
  A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design
  ☆110Updated last year
• dahjan / DMS_opt
  ☆74Updated 5 years ago
• Liuxg16 / GeoPPI
  ☆91Updated 3 years ago
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆165Updated 2 months ago