DeepRank / Deeprank-GNNLinks
Graph Network for protein-protein interface
☆120Updated last year
Alternatives and similar repositories for Deeprank-GNN
Users that are interested in Deeprank-GNN are comparing it to the libraries listed below
Sorting:
- ☆52Updated last year
- ☆133Updated 4 months ago
- open source repository☆143Updated last year
- ☆54Updated last year
- ☆42Updated 2 years ago
- Antibody-Antigen Docking and Affinity Benchmark☆73Updated 4 years ago
- A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction☆61Updated 4 years ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆119Updated 7 months ago
- Dataset and package for working with protein-protein interactions in 3D☆96Updated 5 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- a deep learning architecture for protein-ligand binding affinity prediction☆76Updated last year
- LM-GVP: A Generalizable Deep Learning Framework for Protein Property Prediction from Sequence and Structure☆64Updated last year
- Diffusion model based protein-ligand flexible docking method☆114Updated 11 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆151Updated last week
- ☆114Updated last year
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Updated last year
- a novel DTA predition method using graph neural network☆76Updated 2 years ago
- Code for "Protein Docking Model Evaluation by Graph Neural Networks"☆59Updated 2 years ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆107Updated last year
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆146Updated 2 years ago
- Masif seed paper repository☆160Updated last month
- ☆107Updated last year
- ☆86Updated 3 years ago
- A Python 3 version of the protein descriptor package propy☆46Updated 2 years ago
- ☆113Updated 2 years ago
- ☆72Updated 5 years ago
- Multi-Scale Representation Learning on Proteins (NeurIPS 2021)☆48Updated 2 years ago
- PSICHIC (pronounced Psychic) - PhySIcoCHemICal graph neural network for learning protein-ligand interaction fingerprints from sequence da…☆116Updated last year
- ☆107Updated 2 years ago
- Official implementation of DrugGEN: Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Ad…☆83Updated last month