Vincentx15 / Equi-RCLinks
Equivariant layers for RC-complement symmetry in DNA sequence data
☆11Updated 3 years ago
Alternatives and similar repositories for Equi-RC
Users that are interested in Equi-RC are comparing it to the libraries listed below
Sorting:
- GeneDisco is a benchmark suite for evaluating active learning algorithms for experimental design in drug discovery.☆40Updated 2 years ago
- Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)☆72Updated last year
- PLM-interact: extending protein language models to predict protein-protein interactions.☆30Updated 2 weeks ago
- Massively-Parallel Natural Extension of Reference Frame☆32Updated 2 years ago
- Unsupervised neural network for learning embeddings of GO terms.☆18Updated 3 years ago
- ☆36Updated 10 months ago
- Code for Fold2Seq paper from ICML 2021☆50Updated 3 years ago
- ☆32Updated 3 weeks ago
- Drug Discovery under Covariate Shift with Domain-Informed Prior Distributions over Functions☆24Updated 2 years ago
- Toolkit for structure-based deep learning on RNA.☆40Updated 3 weeks ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- Learning with uncertainty for biological discovery and design☆34Updated 2 years ago
- Official repository for discrete Walk-Jump Sampling (dWJS)☆53Updated last year
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆25Updated last year
- LC-PLM: long-context protein language model based on BiMamba-S architecture☆21Updated 8 months ago
- The code for "Learning Molecular Representation in a Cell"☆36Updated 6 months ago
- Predict disorder and disorder binding from AlphaFold structures☆16Updated 9 months ago
- ☆12Updated 2 years ago
- ☆15Updated 8 months ago
- Open source code for AlphaFold to extract protein embeddings☆27Updated 4 years ago
- Epistatic Net is an algorithm which allows for spectral regularization of deep neural networks to predict biological fitness functions (e…☆18Updated 4 years ago
- ☆26Updated 5 years ago
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆50Updated 2 weeks ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…☆122Updated this week
- Intrinsic-Extrinsic Convolution and Pooling for Learning on 3D Protein Structures☆48Updated 3 years ago
- a Transformer-based neural network for generating highly optimized protein sequences called Regularized Latent Space Optimization (RELSO)☆89Updated 2 years ago
- SE(3)-equivariant point cloud networks for virtual screening☆21Updated 2 years ago
- ☆110Updated 3 years ago
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆40Updated 6 months ago