bmd2007 / benchmark_evalLinks
☆16Updated 2 years ago
Alternatives and similar repositories for benchmark_eval
Users that are interested in benchmark_eval are comparing it to the libraries listed below
Sorting:
- Convenience Python APIs for antibody numbering using ANARCI☆96Updated 2 weeks ago
- Public repository describing training and testing of AntiBERTa.☆59Updated 2 years ago
- ☆114Updated 2 years ago
- open source code for Tencent tFold☆100Updated 2 months ago
- Fitness landscapes for antibodies☆71Updated 4 months ago
- ☆68Updated 4 years ago
- TEIM: TCR-Epitope Interaction Modeling☆49Updated last year
- ☆62Updated 3 years ago
- ☆108Updated 10 months ago
- DeepAAI☆31Updated 5 months ago
- Code for ColabDock paper☆141Updated last month
- A compilation of deep learning methods for protein design☆97Updated 2 years ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆59Updated last year
- Tutorials, cheat sheets, and other resources for computational methods for protein design.☆112Updated last year
- ☆86Updated 2 years ago
- Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction☆34Updated 4 years ago
- Geometric deep learning of protein–DNA binding specificity☆73Updated 2 months ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆99Updated 8 months ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆151Updated last year
- CLIP-based model for aligning epitopes to immune receptors☆11Updated last month
- Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆62Updated 10 months ago
- Predict the structure of immune receptor proteins☆139Updated 4 months ago
- ☆49Updated last year
- predicting peptide-protein interactions☆131Updated last year
- Sequence-to-drug concept adds a perspective on drug design. It can serve as an alternative method to SBDD, particularly for proteins that…☆66Updated last year
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆30Updated 5 months ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆41Updated 10 months ago
- A generalized enzyme kinetics parameter prediction model.☆49Updated 6 months ago
- ☆165Updated 3 years ago
- ☆126Updated last year