biomed-AI / GraphSiteLinks
GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
☆61Updated last year
Alternatives and similar repositories for GraphSite
Users that are interested in GraphSite are comparing it to the libraries listed below
Sorting:
- ☆72Updated 5 years ago
- ☆114Updated last year
- An evolutionary context-integrated deep learning framework for protein engineering☆65Updated 3 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆75Updated 2 months ago
- ☆86Updated 3 years ago
- ☆42Updated last month
- ☆107Updated last year
- RNA Multiple Sequence Alignment☆45Updated 2 years ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆66Updated last month
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆104Updated 3 weeks ago
- DeepAAI☆35Updated 9 months ago
- ☆49Updated 3 weeks ago
- ☆52Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆58Updated 3 weeks ago
- open source code for Tencent tFold☆113Updated 6 months ago
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- ☆74Updated last year
- a deep learning architecture for protein-ligand binding affinity prediction☆76Updated last year
- Official Implementation of IgGM☆135Updated 2 weeks ago
- PLM based active learning model for protein engineering☆83Updated last year
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆145Updated last year
- ☆53Updated last year
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆28Updated last year
- Antibody-specific masked language model☆62Updated 2 years ago
- ☆70Updated 3 years ago
- Code for our paper "Protein sequence design with a learned potential"☆80Updated 2 years ago
- Protein language model trained on coding DNA☆50Updated 11 months ago
- A Python 3 version of the protein descriptor package propy☆46Updated 2 years ago
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆68Updated 3 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆119Updated 6 months ago