ArnovanHilten / GenNetLinks
Framework for Interpretable Neural Networks
☆108Updated 5 months ago
Alternatives and similar repositories for GenNet
Users that are interested in GenNet are comparing it to the libraries listed below
Sorting:
- MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations☆84Updated 10 months ago
- P-NET, Biologically informed deep neural network for prostate cancer classification and discovery☆158Updated 3 years ago
- ☆67Updated last year
- Deep-Learning framework for multi-omic and survival data integration☆84Updated last year
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆50Updated last month
- A toolkit for training deep learning models on genotype, tabular, sequence, image, array and binary data.☆41Updated last week
- ☆146Updated 8 months ago
- predicting expression effects of human genome variants ab initio from sequence☆132Updated 7 months ago
- CMap Notebooks for LINCS 2020 Workshop☆46Updated 3 years ago
- Explainable AI for Bioinformatics☆125Updated 2 years ago
- pyComBat is a Python 3 implementation of ComBat, one of the most widely used tool for correcting technical biases, called batch effects, …☆87Updated last year
- A package to estimate biological organ age using SomaScan plasma proteomics data☆59Updated last year
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆56Updated 4 months ago
- Training and evaluating a variational autoencoder for pan-cancer gene expression data☆172Updated 6 years ago
- Modular framework for deep learning predictions on methylation data.☆55Updated 5 years ago
- covolutional neural network based coexpression analysis☆79Updated 5 years ago
- Preprocessing methylation pipeline, written in python. Easy to use and highly parallelized.☆36Updated 5 years ago
- Discovering novel cell types across heterogenous single-cell experiments☆123Updated 2 years ago
- InMoose is the INtegrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data.☆104Updated last week
- Python packaging for CPTAC data☆96Updated last year
- Gene2Vec: Distributed Representation of Genes Based on Co-Expression☆123Updated 3 years ago
- A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner☆70Updated this week
- Towards Gene Expression Convolutions using Gene Interaction Graphs☆75Updated 3 years ago
- Automated Modelling for Biological Evidence-based Research☆46Updated last year
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆73Updated 6 months ago
- Building classifiers using cancer transcriptomes across 33 different cancer-types☆120Updated 6 years ago
- Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them☆164Updated last year
- Models and datasets for perturbational single-cell omics☆163Updated 3 years ago
- DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis☆21Updated 4 years ago
- ☆50Updated 2 months ago