Framework for Interpretable Neural Networks
☆117Jul 29, 2026Updated 3 months ago
Alternatives and similar repositories for GenNet
Users that are interested in GenNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GEPSi simulates phenotypes for GWAS data based on a range of conditions and biological assumptions.☆12Jun 25, 2024Updated 2 years ago
- Neural Network for Polygenic score analysis☆16Jan 25, 2023Updated 3 years ago
- EpiGEN: an epistasis simulation pipeline☆12Sep 16, 2020Updated 6 years ago
- PLINK reader for Python.☆90May 12, 2025Updated last year
- TOPMed analysis pipeline☆52Oct 10, 2023Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- genetic correlation between phenotypes in the UK biobank☆15Feb 22, 2024Updated 2 years ago
- A positive-unlabeled ensemble learning framework for disease gene prioritization.☆21Nov 10, 2025Updated 11 months ago
- Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DN…☆259Jul 30, 2024Updated 2 years ago
- A Toolset for Chromosome X-Wide Association Studies☆13May 1, 2018Updated 8 years ago
- Drug response prediction☆10Sep 8, 2021Updated 5 years ago
- Code and dataset for SNP2Vec paper☆21May 12, 2023Updated 3 years ago
- A method to detect polygenic adaptation in an admixture graph☆12Feb 22, 2018Updated 8 years ago
- Imputation steps using the Michigan or Sanger imputation server.☆16May 6, 2021Updated 5 years ago
- A toolkit for training deep learning models on genotype, tabular, sequence, image, array and binary data.☆47Oct 9, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code for preparing and running the imageCCA method.☆20Aug 2, 2017Updated 9 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆52Jul 6, 2023Updated 3 years ago
- ☆162Apr 8, 2026Updated 7 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆41Jul 5, 2022Updated 4 years ago
- Software program for generating synthetic datasets for genotypes and phenotypes☆25Jun 1, 2023Updated 3 years ago
- ARG-Needle library for representing and analyzing ancestral recombination graphs (ARGs)☆10Nov 21, 2025Updated 11 months ago
- Prime editing guide RNA prediction☆10Jan 9, 2025Updated last year
- Python module to read binary Plink files.☆18Mar 25, 2026Updated 7 months ago
- Pathway-based sparse deep neural network☆19Nov 9, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Pipeline for the generation and simulation of personalized Flux Balance Analysis models☆12Feb 14, 2021Updated 5 years ago
- LD Score Regression (LDSC)☆806Jan 16, 2026Updated 9 months ago
- cEll tyPe enrIChment☆17Dec 11, 2022Updated 3 years ago
- Modular framework for deep learning predictions on methylation data.☆61Jun 2, 2020Updated 6 years ago
- Convolutional autoencoder for genotype data☆15Feb 22, 2022Updated 4 years ago
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆14Oct 17, 2023Updated 3 years ago
- Code for Variable Selection in Black Box Methods with RelATive cEntrality (RATE) Measures☆20Dec 2, 2020Updated 5 years ago
- Genotype-based Prediction (GenoPred)☆80Oct 29, 2026Updated last week
- Detection and classification selective sweep use domain adaptive model☆11Oct 24, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆17Apr 6, 2021Updated 5 years ago
- ☆33Jul 10, 2025Updated last year
- Single cell Type Enrichment Analysis for Phenotypes (STEAP)☆15Jun 16, 2021Updated 5 years ago
- ☆36Dec 19, 2023Updated 2 years ago
- Tools for ranking in Julia☆11Sep 12, 2021Updated 5 years ago
- Calculate AUC based on GWAS summary statistics only☆10Jun 29, 2018Updated 8 years ago
- HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.☆11Sep 24, 2024Updated 2 years ago