ArnovanHilten / GenNetLinks
Framework for Interpretable Neural Networks
☆108Updated 4 months ago
Alternatives and similar repositories for GenNet
Users that are interested in GenNet are comparing it to the libraries listed below
Sorting:
- MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations☆81Updated 9 months ago
- P-NET, Biologically informed deep neural network for prostate cancer classification and discovery☆156Updated 3 years ago
- ☆67Updated last year
- Deep-Learning framework for multi-omic and survival data integration☆82Updated last year
- pyComBat is a Python 3 implementation of ComBat, one of the most widely used tool for correcting technical biases, called batch effects, …☆87Updated last year
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆50Updated 6 months ago
- A toolkit for training deep learning models on genotype, tabular, sequence, image, array and binary data.☆41Updated 3 weeks ago
- CpGPT: a Foundation Model for DNA Methylation.☆46Updated 3 weeks ago
- Python packaging for CPTAC data☆96Updated last year
- predicting expression effects of human genome variants ab initio from sequence☆128Updated 6 months ago
- Gene2Vec: Distributed Representation of Genes Based on Co-Expression☆122Updated 3 years ago
- Discovering novel cell types across heterogenous single-cell experiments☆123Updated 2 years ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆72Updated 5 months ago
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆55Updated 2 months ago
- ☆55Updated 2 years ago
- CMap Notebooks for LINCS 2020 Workshop☆46Updated 3 years ago
- ☆140Updated 6 months ago
- Preprocessing methylation pipeline, written in python. Easy to use and highly parallelized.☆36Updated 5 years ago
- Modular framework for deep learning predictions on methylation data.☆54Updated 5 years ago
- Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DN…☆189Updated last year
- InMoose is the INtegrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data.☆101Updated this week
- Knowledge-primed neural networks☆38Updated 2 years ago
- covolutional neural network based coexpression analysis☆79Updated 5 years ago
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆50Updated 3 years ago
- Automated Modelling for Biological Evidence-based Research☆46Updated last year
- DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis☆21Updated 4 years ago
- Models and datasets for perturbational single-cell omics☆157Updated 2 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆49Updated 2 years ago
- Biological Network Integration using Convolutions☆62Updated last year
- ☆92Updated 4 years ago