rsinghlab / pyagingLinks
A Python-based compendium of GPU-optimized aging clocks.
☆114Updated last week
Alternatives and similar repositories for pyaging
Users that are interested in pyaging are comparing it to the libraries listed below
Sorting:
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆57Updated 6 months ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆73Updated 2 weeks ago
- ☆93Updated last month
- Knowledge-primed neural networks☆38Updated 2 years ago
- Elucidating the Utility of Genomic Elements with Neural Nets☆70Updated last year
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆57Updated 6 months ago
- Decima is a Python library to train sequence models on single-cell RNA-seq data.☆54Updated last week
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆51Updated 3 months ago
- CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets☆156Updated last week
- A data-centric flow/mass cytometry automated analysis framework☆42Updated 10 months ago
- bioinformatics plotting and tools☆59Updated last year
- mygene is an easy-to-use Python wrapper to access MyGene.Info services.☆95Updated 10 months ago
- Machine learning methods for DNA sequence analysis.☆57Updated 3 months ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆34Updated 8 months ago
- CpGPT: a Foundation Model for DNA Methylation.☆60Updated 3 months ago
- Computational Optimization of DNA Activity (CODA)☆65Updated 8 months ago
- ☆34Updated 10 months ago
- Comparing performance across many methodological dimensions among tools that predict RNA after TF knockdowns and overexpression.☆21Updated 2 months ago
- Code and data used in The Great Repertoire Project☆29Updated 4 years ago
- A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner☆95Updated last month
- ☆36Updated 6 months ago
- Preprocessing methylation pipeline, written in python. Easy to use and highly parallelized.☆36Updated 5 years ago
- InMoose is the INtegrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data.☆111Updated last week
- ☆19Updated last year
- Notebooks used in scvi-tools tutorials☆57Updated this week
- CMap Notebooks for LINCS 2020 Workshop☆49Updated 4 years ago
- CZ CELLxGENE Discover Census☆114Updated last week
- Machine learning tools for biomarker analysis☆72Updated this week
- LLM agents for working with the SRA and associated bioinformatics databases.☆140Updated 3 weeks ago
- Code and documentation for the curation of cellxgene datasets☆50Updated this week