urmi-21 / COVID-19-RNA-Seq-datasetsLinks
A repository for sharing information on available COVID-19 RNA-Seq datasets
☆81Updated 3 years ago
Alternatives and similar repositories for COVID-19-RNA-Seq-datasets
Users that are interested in COVID-19-RNA-Seq-datasets are comparing it to the libraries listed below
Sorting:
- A scalable python-based framework for gene regulatory network inference using tree-based ensemble regressors.☆64Updated last year
- ☆27Updated last year
- A repository for the design and analysis of pooled single cell RNA-seq perturbation experiments.☆97Updated 6 years ago
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆126Updated 9 months ago
- ☆96Updated 4 years ago
- A continually expanding collection of cancer genomics notes and data☆112Updated this week
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆56Updated 2 years ago
- R package to access DoRothEA's regulons☆154Updated last year
- CAusal Reasoning for Network Identification with integer VALue programming in R☆61Updated 2 years ago
- kallisto | bustools workflow for pre-processing single-cell RNA-seq data☆119Updated 3 years ago
- BESCA (Beyond Single Cell Analysis) offers python functions for single-cell analysis☆50Updated 7 months ago
- This contains the dataset for comparing scRNA-seq analysis methods☆92Updated 5 years ago
- SingleCellNet: classify single cells across species and platforms☆140Updated 2 years ago
- A tool that allows to get UMI counts from a single cell protein assay☆87Updated 8 months ago
- An accurate and efficient deep learning method for single-cell RNA-seq data imputation☆89Updated 3 years ago
- Deep Learning based cell composition analysis with Scaden.☆87Updated last year
- CellO: Gene expression-based hierarchical cell type classification using the Cell Ontology☆68Updated 2 years ago
- Imputation method for scRNA-seq based on low-rank approximation☆77Updated 2 years ago
- A repository of pipelines for single-cell data in Nextflow DSL2☆80Updated 2 years ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆49Updated 4 years ago
- Identifying tumor cells at the single-cell level using machine learning☆49Updated last year
- Clonotype Neighbor Graph Analysis☆93Updated 5 months ago
- ☆62Updated 5 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆119Updated 6 months ago
- Tabula Muris Senis☆108Updated 2 years ago
- A BLAST-like toolkit for large-scale scRNA-seq data querying and annotation.☆94Updated last year
- ☆61Updated 4 years ago
- software to detect doublets☆95Updated last year
- data and model repository for single-cell data☆136Updated 2 years ago
- Immunology-related bioinformatics data and tools☆76Updated last year