rezacsedu / XAI-for-bioinformaticsLinks
Explainable AI for Bioinformatics
☆125Updated 2 years ago
Alternatives and similar repositories for XAI-for-bioinformatics
Users that are interested in XAI-for-bioinformatics are comparing it to the libraries listed below
Sorting:
- coding exercise using TCGA immune infiltration data☆45Updated last year
- ☆83Updated 8 months ago
- Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them☆160Updated last year
- ☆50Updated 4 years ago
- ☆49Updated 2 weeks ago
- some resources for startup companies☆52Updated last year
- Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.☆84Updated 4 years ago
- RNA-seq prediction with deep convolutional neural networks.☆185Updated last month
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆68Updated last week
- Python Fundamentals for Biologists☆35Updated 8 months ago
- code to run sei and obtain sei and sequence class predictions☆106Updated 2 years ago
- Collection of cloud-based biomedical data science learning modules funded by the National Institute of General Medical Sciences at the NI…☆74Updated 2 months ago
- CRISPR Cas9 ontarget prediction software☆26Updated 5 months ago
- A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner☆57Updated last week
- R Fundamentals for Biologists☆33Updated 6 months ago
- A DIY guide to gene ontology, pathway, and gene set enrichment analysis☆26Updated 11 months ago
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data☆120Updated 2 months ago
- Microbial analysis in TCGA data☆91Updated last year
- What you need to process the Quarterly DepMap-Omics releases from Terra☆119Updated last week
- Detailed explanation on how to setup database for NCBI IgBlast executable, and using it in Python☆28Updated 3 years ago
- Knowledge-primed neural networks☆38Updated 2 years ago
- step by step tutorial in the website☆22Updated 5 months ago
- Bioinformatics and genomics resources☆77Updated 5 months ago
- predicting expression effects of human genome variants ab initio from sequence☆128Updated 6 months ago
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆55Updated 2 months ago
- This repository contains math tutorials I created for Bioinformatics and Computational Biology.☆91Updated 11 months ago
- A repository for sharing information on available COVID-19 RNA-Seq datasets☆80Updated 3 years ago
- An AI Agent for Fully Automated Multi-omic Analyses☆189Updated 9 months ago
- gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.☆269Updated last month
- Computational Optimization of DNA Activity (CODA)☆60Updated 4 months ago