BIMSBbioinfo / flexynesisLinks
A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner
☆97Updated last month
Alternatives and similar repositories for flexynesis
Users that are interested in flexynesis are comparing it to the libraries listed below
Sorting:
- CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets☆173Updated 2 weeks ago
- Tabula Muris Senis☆107Updated 2 years ago
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆58Updated 7 months ago
- ☆19Updated last year
- Spatial omic analysis toolbox for multi-resolution and multi-omic integration using image registration☆114Updated 3 weeks ago
- Utilizing single-cell omics from patients tumor to predict response and resistance.☆71Updated 2 years ago
- Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey a…☆160Updated last month
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆34Updated 9 months ago
- ☆97Updated last month
- ☆96Updated 4 years ago
- BESCA (Beyond Single Cell Analysis) offers python functions for single-cell analysis☆50Updated 6 months ago
- 🏃 The go-to single-cell Foundation Model☆126Updated last week
- Decima is a Python library to train sequence models on single-cell RNA-seq data.☆58Updated this week
- coding exercise using TCGA immune infiltration data☆46Updated last year
- bioinformatics plotting and tools☆59Updated last year
- Compgen Course 2025, Module 3 Course Material, Multi-omics integration using deep learning☆64Updated 4 months ago
- My youtube programming scripts☆59Updated 11 months ago
- A continually expanding collection of cancer genomics notes and data☆112Updated 2 months ago
- Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.☆84Updated 4 years ago
- Multi-modal single cell analysis pipelines☆62Updated 2 weeks ago
- A simulator for single cell multi-omics and spatial omics data that provides ground truth to benchmark a wide range of methods.☆67Updated last month
- kallisto | bustools workflow for pre-processing single-cell RNA-seq data☆118Updated 3 years ago
- Unified knowledge-driven network inference from omics data☆90Updated 2 weeks ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆57Updated 7 months ago
- A docker image for single-cell analysis☆102Updated 2 months ago
- dandelion - A single cell BCR/TCR V(D)J-seq analysis package for 10X Chromium 5' data☆122Updated last week
- What you need to process the Quarterly DepMap-Omics releases from Terra☆125Updated 3 months ago
- LLM agents for working with the SRA and associated bioinformatics databases.☆141Updated last month
- ☆149Updated last year
- data and model repository for single-cell data☆136Updated 2 years ago