BIMSBbioinfo / flexynesis
A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner
☆21Updated this week
Related projects ⓘ
Alternatives and complementary repositories for flexynesis
- Fit generalized linear models in python.☆27Updated last year
- ☆26Updated last year
- ☆40Updated 3 weeks ago
- Automated cell filtering for single-cell RNA sequencing data☆24Updated last year
- WebGL-based viewer for spatially-resolved transcriptomics data☆26Updated last year
- Multi-omics studies are available here☆51Updated 2 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- Multi-modal single cell analysis pipelines☆55Updated this week
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆22Updated 2 weeks ago
- Dynamic models for single-cell RNA-seq time series.☆39Updated 6 years ago
- Analyzing cellular niches in spatial transcriptomics data☆27Updated this week
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆23Updated 2 years ago
- scRNAseq integration with triplet neural networks☆39Updated last year
- Bioinformatics for Benched Biologists☆22Updated 4 years ago
- Single cell proteomics data processing☆21Updated last month
- epigenome analysis to rank transcription factors☆13Updated 4 years ago
- ☆16Updated 4 months ago
- Marker Selection by matching manifolds and elastic net☆23Updated last month
- RNA velocity validation☆23Updated 2 years ago
- CAusal Reasoning for Network Identification with integer VALue programming in R☆57Updated 11 months ago
- Single Cell Consensus Clustering with Speed☆19Updated last year
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆12Updated 2 years ago
- ☆11Updated 9 months ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆26Updated last month
- ☆34Updated 6 months ago
- Using BCR and expression for sequence embedding☆19Updated 3 weeks ago
- Please consider using/contributing to https://github.com/nf-core/scdownstream☆23Updated 5 months ago
- ☆39Updated this week
- An R package for analyzing high-dimensional cytometry data using the tidyverse.☆19Updated 2 months ago
- Explore and download data from the recount3 project☆31Updated 6 months ago