JBrowse 2 plugin for editing annotations on an Apollo server
☆15Jun 26, 2026Updated this week
Alternatives and similar repositories for Apollo3
Users that are interested in Apollo3 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Manipulate genomic features and validate the syntax and reference sequence of your GFF3 files☆10Dec 26, 2022Updated 3 years ago
- Multithreaded read analysis☆25May 24, 2026Updated last month
- Cantù Lab @ UC Davis - Annotation pipeline - EVM based☆15Nov 1, 2024Updated last year
- ☆24Nov 19, 2025Updated 7 months ago
- ☆45Dec 11, 2025Updated 6 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A Nextflow pipeline for genome and pan-genome annotation☆16Feb 22, 2026Updated 4 months ago
- Python library for SBGN☆11May 19, 2026Updated last month
- Rapid Annotation Transfer Tool☆10May 21, 2025Updated last year
- Example code for calling Panther API services☆13Dec 12, 2023Updated 2 years ago
- Python async data gathering☆11Nov 18, 2024Updated last year
- ☆10Jul 21, 2022Updated 3 years ago
- Construct and Analyze the North American Vitis pangenome☆29Aug 19, 2025Updated 10 months ago
- Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.☆139Mar 11, 2026Updated 3 months ago
- Elliptic functions for Matlab and Octave☆14Apr 25, 2026Updated 2 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Dot2dot: Accurate Whole-Genome Tandem Repeats Discovery☆11Oct 5, 2022Updated 3 years ago
- Single cell ANANSE Gene-regulatory-network analysis from Seurat objects☆11Nov 12, 2023Updated 2 years ago
- blastn2dotplots: multiple dot-plot visualizer☆24Sep 15, 2025Updated 9 months ago
- Haplotype-aware assembly of complex regions and small genomes☆15May 21, 2026Updated last month
- KnetBuilder data integration platform for building knowledge graphs. Previously known as ondex.☆16Apr 2, 2026Updated 3 months ago
- renders the mandlebrot fractal entirely in the browser using leaflet☆16Feb 16, 2026Updated 4 months ago
- Web app for automated, systematic, and integrated RNA-seq differential expression analysis☆15May 1, 2026Updated 2 months ago
- A Landscape Genomic Analysis Toolkit in R☆23May 24, 2026Updated last month
- Genome-Genome circle synteny☆25Dec 1, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- R package to read ImageJ ROI files☆12Aug 17, 2024Updated last year
- Collection of SO Ontologies☆105Sep 10, 2025Updated 9 months ago
- An easy-to-use way for running Galaxy workflows.☆20Nov 19, 2019Updated 6 years ago
- A robust Python tool for the annotation of 3’ UTRs☆25May 18, 2026Updated last month
- A nf-core pipeline for untargeted whole genome reconstruction with iSNV detection from metagenomic samples.☆39Updated this week
- Clonal reconstruction from HTS data☆10Oct 27, 2021Updated 4 years ago
- polysat 1.7: tools for polyploid microsatellite analysis☆12Dec 20, 2024Updated last year
- Misassembly Identifier☆22Jun 2, 2026Updated last month
- A collection of 280+ Boolean networks from various sources useful for benchmarking or testing.☆24May 29, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Rcpp: Including C++ code in a Subdirectory within Src☆17Jun 26, 2026Updated last week
- "Global Importance Analysis: A Method to Quantify Importance of Genomic Features in Deep Neural Networks" by Koo et al.☆13Jun 22, 2022Updated 4 years ago
- RxODE is an R package that facilitates easy simulations in R☆21Mar 28, 2017Updated 9 years ago
- Deep learning the cis-regulatory code for gene expression in selected model plants☆24Mar 15, 2024Updated 2 years ago
- Place to discuss the future design of a universal microscope hardware interface☆16May 18, 2021Updated 5 years ago
- GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the sc…☆149Apr 13, 2026Updated 2 months ago
- Some components that speed up and reduce resource cost for original ALLHiC☆15Jun 21, 2025Updated last year