ThomasJamesMitchell / deSCeRNAMutLinks
Method for de novo mutation calling from droplet based single cell RNA seq data
☆14Updated 4 years ago
Alternatives and similar repositories for deSCeRNAMut
Users that are interested in deSCeRNAMut are comparing it to the libraries listed below
Sorting:
- Integration of gut cell atlases☆30Updated last month
- Aligning gene expression trajectories of single-cell reference and query systems☆80Updated 4 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- Gene set enrichment analysis for single-cell RNAseq data☆30Updated 2 years ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆43Updated 2 years ago
- R package for Protein activity analysis of single-cell RNAseq.☆85Updated 3 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆35Updated last month
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- R package for pathway analysis in scRNA-seq data☆76Updated last year
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆65Updated 3 years ago
- ☆32Updated 3 years ago
- ☆55Updated last year
- ☆50Updated 5 years ago
- The codes and files for the study of subsolid nodules (SSN).☆15Updated 5 years ago
- Accurate and fast cell marker gene identification with COSG☆53Updated this week
- ☆37Updated 3 years ago
- Spatial transcriptomics of heart tissue☆28Updated 3 years ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆57Updated 3 weeks ago
- HCC single cell analysis for Alvarez, Benhammou et al.☆17Updated 3 years ago
- ☆15Updated 2 years ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Updated 3 years ago
- ☆25Updated 2 years ago
- ☆47Updated 3 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 8 months ago
- ☆32Updated 10 months ago
- Draw phylogenetic trees of tumor evolution☆86Updated 2 years ago
- ☆41Updated 4 years ago
- Codes for the scPLC project☆72Updated 3 years ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆26Updated last year