ThomasJamesMitchell / deSCeRNAMut

Related projects ⓘ

Alternatives and complementary repositories for deSCeRNAMut

• shyhihihi / MERCI
  MERCI for tracing of mitochondrion transfer between single cancer and T cells
  ☆21Updated 6 months ago
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆27Updated 3 years ago
• ChanLab-UTSW / BreastCancer_Integrated
  ☆19Updated 7 months ago
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆28Updated last year
• Lan-lab / sc-GC
  ☆27Updated 2 years ago
• bio-Pixel / panVC
  ☆31Updated 8 months ago
• genecell / COSG
  Accurate and fast cell marker gene identification with COSG
  ☆38Updated last year
• Teichlab / Pan_fetal_immune
  Collection of scripts for analysis of pan fetal immune atlas
  ☆25Updated 2 years ago
• marcalva / hcc_sc_2022
  HCC single cell analysis for Alvarez, Benhammou et al.
  ☆16Updated 2 years ago
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆46Updated last month
• Single-Cell-Genomics-Group-CNAG-CRG / TonsilAtlas
  Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)
  ☆25Updated last month
• liziyie / scDVA
  An R shiny based tool used for single cell RNA-seq data visualization and analysis.
  ☆32Updated 3 years ago
• jlaffy / scalop
  Single Cell Analysis Operations
  ☆13Updated 8 months ago
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆26Updated 2 years ago
• youqiongye / CRC_scRNAseq
  ☆42Updated 2 years ago
• perou-lab / MultiK
  MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…
  ☆21Updated last year
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆46Updated last year
• Junjie-Hu / NSCLC-immunotherapy
  ☆17Updated 10 months ago
• bioinfo-biols / SEVtras
  sEV-containing droplet identification in scRNA-seq data (SEVtras)
  ☆20Updated 2 weeks ago
• jumphone / Vector
  Unsupervised Inference of Developmental Directions for Single Cells
  ☆21Updated 10 months ago
• Xiaxy-XuLab / PanCAF
  ☆34Updated 2 years ago
• aerickso / SpatialInferCNV
  Clone Calling from Visium Spatial Transcriptomics of Cancer samples
  ☆59Updated last year
• UCSF-DSCOLAB / pan_cancer_immune_archetypes
  ☆12Updated last year
• guokai8 / scGSVA
  scGSVA: Perform GSVA for single cell RNA seq
  ☆48Updated last week
• jalon9358 / LianLab_CRCLM
  ☆11Updated last year
• aet21 / SCENT
  Estimation of Single-Cell Potency with Single Cell Entropy
  ☆38Updated last year
• KChen-lab / METAFlux
  ☆48Updated 4 months ago
• califano-lab / single-cell-pipeline
  ☆42Updated 4 years ago
• Yelab2020 / Cottrazm
  Construct Tumor Transition Zone Microenvironment
  ☆35Updated this week
• msraredon / NICHES
  Niche Interactions and Cellular Heterogeneity in Extracellular Signaling
  ☆50Updated last month