Codon usage tables in code-friendly format + Python bindings
☆43May 9, 2025Updated last year
Alternatives and similar repositories for python_codon_tables
Users that are interested in python_codon_tables are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A versatile DNA sequence optimizer☆277Nov 5, 2025Updated 8 months ago
- An amino acid sequence annotator☆17May 15, 2025Updated last year
- Easily download genomes and build BLAST/Bowtie indexes in Python☆22Sep 30, 2022Updated 3 years ago
- ☆26Apr 2, 2026Updated 3 months ago
- RNN-based Codon Optimization Tool. Publication: https://doi.org/10.1186/s12859-023-05246-8☆70Apr 10, 2023Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Software for the analysis and visualization of site-saturation mutagenesis experiments☆19Apr 21, 2023Updated 3 years ago
- Find common blocks and differences between DNA sequences☆46Nov 5, 2025Updated 8 months ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆48May 13, 2026Updated 2 months ago
- Read DNA sequences from colourful Microsoft Word documents☆34May 12, 2025Updated last year
- DNA overhang misannealing data for Python☆13May 15, 2025Updated last year
- A route planner for DNA assembly☆37May 12, 2025Updated last year
- Short overhangs design for DNA assembly☆15Jun 8, 2022Updated 4 years ago
- Highly customizable, ambiguity-aware dotplots for visual sequence analyses☆125Apr 20, 2026Updated 3 months ago
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…☆229Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Software for predicting translation initiation rates in bacteria☆34Jul 30, 2025Updated 11 months ago
- ALFA: Annotation Landscape for Aligned Reads☆14Jun 30, 2020Updated 6 years ago
- 🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies☆17Jan 23, 2023Updated 3 years ago
- Coarse-grained simulations of biomolecular complexes☆13Aug 2, 2023Updated 2 years ago
- Calculate indel trajectory likelihoods using methods of Miklós, Lunter & Holmes (2004), De Maio (2020), and Holmes (2020)☆14Sep 17, 2022Updated 3 years ago
- Colinear block visualisation tool☆31Jan 17, 2024Updated 2 years ago
- Pairwise machine learning models for phage-host interaction prediction☆22Jun 23, 2024Updated 2 years ago
- Two pass alignment for long reads☆22Mar 9, 2021Updated 5 years ago
- A pure Python implementation of the SBOL standard.☆21Feb 13, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- https://www.nature.com/articles/s41598-020-74091-z#Tab1☆41Mar 13, 2024Updated 2 years ago
- 🎺 Plot DNA digestion band patterns with Python☆20May 12, 2025Updated last year
- Compute strain abundance in a defined microbial community☆10Jul 27, 2023Updated 2 years ago
- Machine learning-driven antibody design☆63Jul 5, 2023Updated 3 years ago
- a DNA assembly library☆23Aug 13, 2025Updated 11 months ago
- QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources☆48May 12, 2026Updated 2 months ago
- Automatically exported from code.google.com/p/macs☆17Oct 17, 2019Updated 6 years ago
- repository-based plasmid design☆31Nov 28, 2022Updated 3 years ago
- Interface to LZMA compression library☆12Mar 25, 2015Updated 11 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- General low-level API☆50Jul 18, 2022Updated 4 years ago
- A PCR primer tool for DNA assembly flows☆33Apr 24, 2024Updated 2 years ago
- Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide☆28Mar 30, 2023Updated 3 years ago
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆66May 12, 2025Updated last year
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆36Jun 1, 2022Updated 4 years ago
- A python wrapper for the benchling api☆49Sep 11, 2020Updated 5 years ago
- ☆14Dec 10, 2018Updated 7 years ago